FastQCFastQC Report
Sun 21 May 2023
EGAF00007833642

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833642
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences117889
Sequences flagged as poor quality0
Sequence length235-238
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG4113534.89299256079872No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT3231227.40883373342721No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG61315.2006548532942No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG56624.802822994511787No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT41173.492268150548397No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC22921.94420174910297No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG22691.9246918711669452No Hit
GCTGCGTTCTTCATCGATGCAAACCTCGGCCGCACCCCAAGGCCTTGCTG19681.669366946873754No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT16981.4403379450160745No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCGCCTGTCCGAGGT15551.3190373995877478No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT11931.01196888598597No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT9210.7812433730034185No Hit
GCTGCGTTCTTCATCGATGCGAGAGTCGAGATATCCGTTGCCGAGAGTCG6000.5089533374615104No Hit
GCTGCGTTCTTCATCGATGCTCTCGGCAAAGGCGCTCGCCTCGGCCCGCA5750.4877469484006141No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT5130.4351551035295914No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG4760.40376964771946494No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT4630.3927423254077989No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG4140.3511778028484422No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT3440.2917999134779326No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGTTGAAAGTTG2440.20697435723434757No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG2370.2010365682972966No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATTCGTTGCCGAGAGTCG2360.20018831273486076No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCA2310.1959470349226815No Hit
GCTGCGTTCTTCATCGATGCGTAGACAGACGAAGCACAGCCAAGTAGCAG2290.19425052379780983No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG2250.1908575015480664No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTAAAAGTTG2170.1840714570485796No Hit
GCTGCGTTCTTCATCGATGCCCTGGTCCCCGACGCACGCGCCTTTCGTCT2130.1806784347988362No Hit
GCTGCGTTCTTCATCGATGCGCTGCGCAAGAAGGAGGCGAAAACATGGCT2040.17304413473691352No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTTG1970.16710634579986258No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT1910.1620168124252475No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGGGATATCCGTTGCCGAGAGTCA1910.1620168124252475No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA1900.16116855686281162No Hit
GCTGCGTTCTTCATCGATGCTTTTCAGTGCGTGCCCTTCGCACATCTGCG1800.15268600123845313No Hit
GCTGCGTTCTTCATCGATGCCCGGCAACTTTCGCAGAACGTCGCCGATGG1760.14929297898870972No Hit
GCTGCGTTCTTCATCGATGCCACCACCTCAATGCCATCTCGCTGATCTGG1690.14335519005165875No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCTGTTGCCGAGAGTCG1670.14165867892678705No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTTCCGAGAGTCG1650.13996216780191537No Hit
GCTGCGTTCTTCATCGATGCCTTTGCCGAAGACGAACCGTGGCGGGCCGT1600.1357208899897361No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTG1550.13147961217755685No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC1530.12978310105268515No Hit
GCTGCGTTCTTCATCGATGCGAGAGCTGAGATATCCGTTGCCGAGAGTCG1520.1289348454902493No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT1470.12469356767807005No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT1440.1221488009907625No Hit
TCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1350.11451450092883983No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT1320.11196973424153228No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT1260.10688020086691719No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)