FastQCFastQC Report
Sun 21 May 2023
EGAF00007833644

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833644
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences118501
Sequences flagged as poor quality0
Sequence length235-238
%GC59

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCG6292453.099973839883205No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1396911.788086176487962No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT78346.61091467582552No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG64245.421051299145155No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG60335.091096277668543No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG13321.12404114733209No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCTCCTGTCCGAGGT12951.0928177821284208No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT10870.9172918371996861No Hit
GCTGCGTTCTTCATCGATGCCAGTGAGATACGGCTGCGTTCTTCATCGAT10160.8573767309980506No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA9040.7628627606518088No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG7290.6151846819858061No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTTCACTTCGCAAATCAAAATAA6900.5822735673116683No Hit
GCTGCGTTCTTCATCGATGCAGTGAGATACGGCTGCGTTCTTCATCGATG5760.48607184749495785No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG4440.37468038244403No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT3110.26244504265786783No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCAAGAGTCG3040.25653791951122773No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT2950.24894304689411906No Hit
GCTGCGTTCTTCATCGATGCGAGATCCGAGATATCCGTTGCCGAGAGTCG2820.2379726753360731No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG2820.2379726753360731No Hit
GCTGCGTTCTTCATCGATGCGCACACTACTCCCACCGCCCCCGAGTGCCT2650.22362680483708997No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT2440.20590543539716963No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG2410.20337381119146675No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGTCGAAAGTCC2350.19831056278006096No Hit
GCTGCGTTCTTCATCGATGCCTCAGCTGCAGTGTGCCCCACTGTAACCCC2320.195778938574358No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCTGTTGCCGAGAGTCG2200.1856524417515464No Hit
GCTGCGTTCTTCATCGATGCCAGTGAGATACGGCTGCGTTCTTCATCTTT2140.1805891933401406No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTGG1970.16624332284115748No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCTTTGCCGAGAGTCG1970.16624332284115748No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATTTCTGTTGCCGAGAGTCG1960.16539944810592316No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG1890.15949232495928303No Hit
GCTGCGTTCTTCATCGATGCAAGAGCTGAGATATCCGTTGCCGAGAGTCG1830.15442907654787724No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCGCCTGTCCGAGGT1810.15274132707740865No Hit
GCTGCGTTCTTCATCGATGCAGTGAGATACGGCTGCGTTCTTCATCTTTT1740.14683420393076851No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT1640.1383954565784255No Hit
GCTGCGTTCTTCATCGATTCAAGAGCCGAGATATCCGTTGCCGAGAGTCG1640.1383954565784255No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC1590.134176082902254No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCTGAGAGTCG1540.1299567092260825No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT1530.12911283449084818No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT1510.12742508502037958No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT1480.12489346081467666No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCTTACTCCACAACAGG1400.11814246293280226No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCAGTTGCCGAGAGTCG1390.11729858819756794No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG1380.11645471346233364No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC1370.11561083872709936No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT1360.11476696399186505No Hit
GCTGCGTTCTTCATCGATGCCTCTTCCGCCGAGAACCTGGGAGAGGTTTT1300.10970371558045924No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG1290.10885984084522493No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGATATATCCGTTGCCGAGAGTCG1270.10717209137475632No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAAAGTCG1250.10548434190428772No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)