FastQCFastQC Report
Wed 8 May 2024
EGAF00007833646

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833646
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences84789
Total Bases20 Mbp
Sequences flagged as poor quality0
Sequence length236-238
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG3334139.322317753482174No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT950011.204283574520279No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT73398.655603910884667No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG39014.600832655179327No Hit
GCTGCGTTCTTCATCGACACGAGAGCCAAGATATCCATTGCCAGGAGTCA38704.564271308778261No Hit
GCTGCGTTCTTCATCGATGCGTTCAGGTGTACGGCTGCGTTCTTCATCGA13571.6004434537498966No Hit
GCTGCGTTCTTCATCGATGCGTAGACAGACGAAGCACAGCCAAGTAGCAG12961.5285001592187666No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATTAAAATAA12611.4872212197336918No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT10421.2289329983842243No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCGCCTGTCCGAGGT8420.9930533441837974No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA8090.9541332012407269No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT7000.8255787897014943No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT6710.7913762398424324No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT6210.7324063262923256No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT6020.7099977591432851No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT5800.6840509971812381No Hit
GCTGCGTTCTTCATCGATGCGTTCAGGTGTACTGCTGCGTTCTTCATCGA5380.6345162697991484No Hit
GCTGCGTTCTTCATCGATGCGTTCAGGTGTACGGCTGCGTTCTTCATCGG4690.5531377891000012No Hit
GCTGCGTTCTTCATCGATGCGTTCAGGTGTACCGCTGCGTTCTTCATCGA4550.5366262133059713No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGTTG4440.5236528323249479No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG3680.4340185637287856No Hit
GCTGCGTTCTTCATCGATGCGTTCAGGTGTACAGCTGCGTTCTTCATCGA3430.4045336069537322No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCA3340.39391902251471295No Hit
GCTGCGTTCTTCATCGATGCCTTTGCCGAAGACGAACCGTGGCGGGCCGT3250.3833044380756938No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTCCACTTCGCAAATCAAAATAA3200.3774074467206831No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG3130.3691516588236682No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA3020.35617827784264466No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG2970.350281286487634No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT2660.31371994008656784No Hit
GCTGCGTTCTTCATCGATGCTGGAACCAAGAGATCCGTTGTTGAAAGTTT2150.253570628265459No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT2090.24649423863944614No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCATTGCCGAGAGTCG2060.24295604382643973No Hit
GCTGCGTTCTTCATCGATGCGTTCAGGTGTACTGCTGCGTTCTTCATCGG2040.2405972472844355No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGCCGAGAGTCG1960.23116206111641838No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCTAGATATCCGTTGCCGAGAGTCG1830.21582988359339067No Hit
GCTGCGTTCTTCATCGATGCGTTCAGGTGTACCGCTGCGTTCTTCATCGG1770.20875349396737783No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTCGCAAATCA1760.2075740956963757No Hit
GCTGCGTTCTTCATCGATGCCGACGAATATGCGCAAAACCCCGGCCTGCA1650.19460071471535223No Hit
GCTGCGTTCTTCATCGATGCGTTCAGGTGTACAGCTGCGTTCTTCATCGG1450.17101274929530952No Hit
GCTGCGTTCTTCATCGATGCCCGCATGCCTGTTCGTCGCTACGAGGTGCT1380.16275696139829457No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCTAGAGTCG1370.16157756312729246No Hit
TCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG1350.1592187665852882No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT1320.15568057177228178No Hit
GCTGCGTTCTTCATCGATTCGAGAGCCGAGATATCCGTTGCCGAGAGTCG1320.15568057177228178No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCTGTTGCCGAGAGTCG1270.1497835804172711No Hit
GCTGCGTTCTTCATCGATCGTCTTCCTTATTCTCAGACAAAATAAACTTC1140.13445140289424334No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT1130.1332720046232412No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA1110.13091320808123696No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA1100.12973380981023483No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT1070.12619561499722842No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCATTGCCAGGAGTCA1060.1250162167262263No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTTG990.11676042882921134No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCTTTGCCGAGAGTCG980.11558103055820919No Hit
GCTGCGTTCTTCATCGATGCAGCATTGCCGGACTTGACAACCTTAATCGC940.11086343747420066No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG940.11086343747420066No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCAGAGAGTCG910.10732524266119427No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCTTTGTTGAAAGTTT880.10378704784818785No Hit
GCTGCGTTCTTCATCGATACGAGAGCCAAGATATCCATTGCCAGGAGTCA880.10378704784818785No Hit
GCTGCGTTCTTCATCGATGCCAGCGCTGCGGGGTCGGGGATATCGGCGAG870.10260764957718572No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)