FastQCFastQC Report
Sun 21 May 2023
EGAF00007833649

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833649
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences140242
Sequences flagged as poor quality0
Sequence length247-250
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC7328752.25752627600861No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC1720912.270931675247072No Hit
GGAAGTAAAAGTCGTAACAAGGATGTTGCGTTAAGGTTTCGGATAAAGCA107147.639651459619801No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGATGAAGAACGCAGCTCGTCTGAC45953.276479228761712No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC35052.499251294191469No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC31122.2190214058555924No Hit
GGAAGTAAAAGTCGTAACAAGGTATCAGTAGGTGAACCTGCTGATGGATC27071.9302348797079334No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG25031.7847720369076312No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC20151.4368020992284765No Hit
GGAAGTAAAAGTCGTAACAAGGTAGAGAAAATGAAGAAATAAAGGTTGGT13920.9925699861667688No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC9890.7052095663210736No Hit
GGAAGTAAAAGTCGTAACAAGGAAGGAGCATATATGATTCAGCAGGAAAC8220.5861296901071006No Hit
GGAAGTAAAAGTCGTAACAAGGATAACGTGGAATTTGGGACTCAGCCAAC5120.3650832133027196No Hit
GGAAGTAAAAGTCGTAACAAGGAGGATCTTAGCACATGCACATAGAAACA4960.3536743628870096No Hit
GGAAGTAAAAGTCGTAACAAGGAAGAGCTGATCGACTTCGTACAGAATGG4940.3522482565850458No Hit
GGAAGTAAAAGTCGTAACAAGGCTTTGGAGTAGACCATTTAGTGAATGGA4430.3158825458849703No Hit
GGAAGTAAAAGTCGTAACAAGCGGTAAGAAGAAGACAATTAGCACTTGAC4110.2930648450535503No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACCGGAAGGTGCGGATGGATC4050.28878652614765904No Hit
GGAAGTAAAAGTCGTAACAAGAGCAGAAGGAATTCAGAAGAGCCAGGGTG3950.2816559946378403No Hit
GGAAGTAAAAGTCGTAACAAGCCAAAACCTGTTACATCAGTCATCGCTTT3900.27809072888293096No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAAACAGAATCCGAAAAGAGCACA3720.2652557721652572No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCCTACGAGAACGTGGGGATGGATC3660.260977453259366No Hit
GGAAGTAAAAGTCGTAACAAGGAAAAGTGGGATAGTTTCTTCTTTGGAGA3600.2566991343534747No Hit
GGAAGTAAAAGTCGTAACAAGGATGTTGCGTCAAGGTTTCGGATAAAGCA3480.2481424965416922No Hit
GGAAGTAAAAGTCGTAACAAGGTAGAGATAATGAAGAAACAAAGGTTGGT3360.23958585872990973No Hit
GGAAGTAAAAGTCGTAACAAGGTTCATCGATGAAGAACGCAGCTCGTCTG3200.22817700831419974No Hit
GGAAGTAAAAGTCGTAACAAGGAAGAAGTGAAATTCCTGAATAGACCAAT3100.221046476804381No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGTGGCATAGATGGTGATAACTTGTA2930.20892457323768912No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC2480.1768371814435048No Hit
GGAAGTAAAAGTCGTAACAAGGCACGTCGGCACACTGGAAGCCATAAGCT2450.17469802199055917No Hit
GGAAGTAAAAGTCGTAACAAGCGCGGCAGCAGCGGCGCAGACCTCATCGT2290.1632891715748492No Hit
GGAAGTAAAAGTCGTAACAAGGCAGAATTGCTTAAATGGATGGTTTCTGG2080.14831505540422982No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA2040.14546284280030233No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAAC2000.14261063019637485No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGAAGGATC1960.13975841759244734No Hit
GGAAGTAAAAGTCGTAACAAGGCAGAAGAGCAAGCGCGTAAAGCTGCTGA1820.1297756734787011No Hit
GGAAGTAAAAGTCGTAACAAGGACTACAGAAAGAAACAGGGTCACAGACA1730.12335819511986423No Hit
GGAAGTAAAAGTCGTAACAAGGAACGTTCTGCCCTTGCGGCAGGATTCCG1690.12050598251593674No Hit
GGAAGTAAAAGTCGTAACAAGGAGCTGAATGAGGCTTTTGCCGAGTTTAA1630.1162276636100455No Hit
GGAAGTAAAAGTCGTAACAAGGTAAAGATAATGTACGCGTTTGGCTGAAA1560.11123629155317238No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC1520.10838407894924489No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)