FastQCFastQC Report
Sun 21 May 2023
EGAF00007833650

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833650
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences140242
Sequences flagged as poor quality0
Sequence length237-238
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT4849334.57808645056403No Hit
GCTGCGTTCTTCATCGATGCCTGGTCAGACGAGCTGCGTTCTTCATCGAT2813420.06103734972405No Hit
GCTGCGTTCTTCATCGATGCCGATTTGTTTCTCAAAATCACCCTGACCAT92286.5800544772607354No Hit
GCTGCGTTCTTCATCGATGCCTGGTCAGACGAGCTGCGTTCTTCATCGGC76835.478387358993739No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT66034.708289955933315No Hit
GCTGCGTTCTTCATCGATGCTGGTCAGACGAGCTGCGTTCTTCATCGATG33082.3587798234480397No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG26391.8817472654411658No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG23531.6778140642603498No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT20721.4774461288344432No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG19731.4068538668872377No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG18631.3284180202792315No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA12570.8963078107842158No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCA11830.8435418776115571No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT9520.6788265997347442No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG8990.6410347827327049No Hit
GCTGCGTTCTTCATCGATGCTGGTCAGACGAGCTGCGTTCTTCATCGGCT8790.6267737197130674No Hit
GCTGCGTTCTTCATCGATGCCTGGTCAGACGAGCTGCGTTCTTCATCCTT8260.5889819027110281No Hit
GCTGCGTTCTTCATCGAAACGGATATAGCTTCCGTCTTTTCTTCTTGTTT7490.5340768100854237No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGTTG6900.4920066741774932No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG5770.41143166811654136No Hit
GCTGCGTTCTTCATCGATGCCTGGTCAGACGAGCTGCGTTCTTCATCTTT5480.390753126738067No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT4720.33656108726344464No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG4440.31659559903595214No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT3990.2845082072417678No Hit
GCTGCGTTCTTCATCGATGCACCTGAGCCAATTTTTGGCTTGGCGGTAAC3840.2738124099770397No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT3510.25028165599463786No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT3260.232455327220091No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACACGTGT3160.22532479571027225No Hit
GCTGCGTTCTTCATCGATGCCTGGTCAGACGAGCTGCTGGTCAGACGAGC3020.21534205159652603No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT3000.21391594529456226No Hit
GCTGCGTTCTTCATCGGCGCAGTCCTTGTCATTTACTACAAACAAATTTC2980.21248983899259852No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCTCCTGTCCGAGGT2860.20393320118081604No Hit
GCTGCGTTCTTCATCGACTCCCAAAACCACACACATGAAGTATGTGCGGT2480.1768371814435048No Hit
GCTGCGTTCTTCATCGATGCCTGGTCAGACGAGCTGCGTTCTTCATCGCC2470.1761241282925229No Hit
GCTGCGTTCTTCATCGATACGAGAACCAAGAGATCCATTGTTAAAAGTTT2460.17541107514154106No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA2240.15972390581993984No Hit
GCTGCGTTCTTCATCGCTGGTCAGACGAGCTGCGTTCTTCATCGCTGGTC2150.15330642746110296No Hit
GCTGCGTTCTTCATCGATGCCGGGTTTGCATTGACGCGGGGCGCGGTTGG2070.14760200225324796No Hit
GCTGCGTTCTTCATCGATGCGAGCAAGCGACGTTATGTGGTTTATATTTG2010.1433236833473567No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG1850.13191483293164674No Hit
GCTGCGTTCTTCATCGATGCCGATATGTTTCTCAAAATCACCCTGACCAT1820.1297756734787011No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG1700.1212190356669186No Hit
GCTGCGTTCTTCATCGATGCCTGGTCAGACGAGCTGCGTTCTTCATCGAA1660.11836682306299111No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT1610.11480155730808174No Hit
GCTGCGTTCTTCATCGATATGTTTTGGTAATGGCAACTGGACCAAAATCC1580.11266239785513613No Hit
GCTGCGTTCTTCATCGATGCCTGGTCAGACGAGCTGCGTTCTTCATCTGC1570.11194934470415425No Hit
GCTGCGTTCTTCATCGATGCCTGGTCAGACGAGCTCTGGTCAGACGAGCT1540.10981018525120863No Hit
GCTGCGTTCTTCATCGATGGATTTAACACCTGGTGTTTCCACGCGAGTCA1460.10410576004335365No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)