FastQCFastQC Report
Sun 21 May 2023
EGAF00007833654

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833654
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57764
Sequences flagged as poor quality0
Sequence length235-238
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT2167137.516446229485496No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT1092818.918357454469913No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG29165.048126861020704No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT26764.632643168755626No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG17613.048611591995014No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT16352.8304826535558476No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC14212.460009694619486No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT12282.1258915587563187No Hit
GCTGCGTTCTTCATCGGCGCAGTCCTTGTCATTTACTACAAACAAATTTC11521.994321722872377No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT9921.7173325946956581No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG9031.5632573921473583No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG8751.5147842947164325No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACAATGTGTT5861.0144726819472336No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT3780.6543868153174988No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG3270.5660965307111696No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGCTGAAAGTTT3220.5574406204556471No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT2270.39297832560072016No Hit
GCTGCGTTCTTCATCGATGCTGTCCATGGTCACGCGATGCTCTCCTCGAT2070.3583546845786303No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA1980.34277404611868983No Hit
GCTGCGTTCTTCATCGATGCCGGAACAAAGAGATCCGTTGTTGAAAGTTT1880.32546222560764493No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA1860.3219998615054359No Hit
GCTGCGTTCTTCATCGATGCGTAGACAGACGAAGCACAGCCAAGTAGCAG1800.3116127691988089No Hit
GCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGTTT1750.3029568589432865No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA1730.2994944948410775No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG1520.2631396717678831No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT1520.2631396717678831No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT1490.2579461256145696No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT1440.24929021535904713No Hit
GCTGCGTTCTTCATCGATGCCGATATGTTTCTCAAAATCACCCTGACCAT1390.24063430510352468No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT1290.22332248459247975No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT1160.20081711792812132No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT1160.20081711792812132No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTA1100.19043002562149436No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTTTTGAAAGTTT970.16792465895713593No Hit
GCTGCGTTCTTCATCGGTACGAAGTACATAAACAGCGAGGTTAATCTTTT950.16446229485492694No Hit
TCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT930.16099993075271796No Hit
GCTGCGTTCTTCATCGATGCCATGAATCCCTGCAGATATCCAACCAGCTC930.16099993075271796No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG900.15580638459940446No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGCGTAAACACTGTGATGTCTTC850.147150474343882No Hit
GCTGCGTTCTTCATCGATACGAGAACCAAGAGATCCATTGTTAAAAGTTT840.1454192922927775No Hit
GCTGCGTTCTTCATCGATGCAGTCCTTGTCATTTACTACAAACAAATTTC820.14195692819056854No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC800.13849456408835953No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCAAGATATCCATTGCCGAGAGTCA700.12118274357731458No Hit
GCTGCGTTCTTCATCGATGTGTTTTGGTAAGGGTAACTGCACCAAAATAC660.11425801537289662No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCAAGGCCGGACGATCGGGCAAACT640.11079565127068763No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTG640.11079565127068763No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCGCCTGTCCGAGGT610.10560210511737414No Hit
GCTGCGTTCTTCATCGATGCCTCGTCGTAATCTCCATAGCCGTGCAAACT600.10387092306626965No Hit
GCTGCGTTCTTCATCGATGCCAAATATACCGCCGTATCTATACTCCCCCC590.10213974101516517No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTA580.10040855896406066No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)