FastQCFastQC Report
Sun 21 May 2023
EGAF00007833672

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833672
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences47831
Sequences flagged as poor quality0
Sequence length235-238
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1163924.33359118563275No Hit
GCTGCGTTCTTCATCGATGCCGCCAGGCAGACCTACGAATACGCCGAAGT744415.563128514979823No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA491510.275762580753069No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTCCACTTCGCAAATCAAAATAA29646.196817963245594No Hit
GCTGCGTTCTTCATCGGCGCAGTCCTTGTCATTTACTACAAACAAATTTC20934.375823210888337No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT19554.0873073947858085No Hit
GCTGCGTTCTTCATCGATTTCGCCCAACAATGCTTCAGGAGAAACGACAA13812.8872488553448603No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT12342.579916790366081No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG11492.4022077732014804No Hit
GCTGCGTTCTTCATCGATGCCGAGCATGCTTTTGACCCGATTTACGCCCG5811.2146933996780331No Hit
GCTGCGTTCTTCATCGATGCCGATTTGTTTCTCAAAATCACCCTGACCAT5271.1017959064205223No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT4670.9763542472455102No Hit
GCTGCGTTCTTCATCGATGCGTGAGCCGAGATATCCGTTGCCGAGAGTCG4660.9742635529259268No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT3660.7651941209675733No Hit
GCTGCGTTCTTCATCGATGCCTTTGCCGAAGACGAACCGTGGCGGGCCGT3490.7296523175346532No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC3120.6522966277100626No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG2560.5352177458133847No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT2490.5205828855762998No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT2180.45577136166921034No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT2080.43486441847337504No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG1890.3951412264012879No Hit
GCTGCGTTCTTCATCGATGGTGTTGAGCGTACTTTATCAGAGATTAACCC1750.36587150592711837No Hit
GCTGCGTTCTTCATCGATGCAGTCCTTGTCATTTACTACAAACAAATTTC1680.35123664569003366No Hit
GCTGCGTTCTTCATCGATGCTGATTTCGCCGTTGTGAATGCTGCCGCTAA1500.31360414793753005No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA1490.3115134536179465No Hit
GCTGCGTTCTTCATCGATGGATTTAACACCTGGAGTTTCGACGCGAGTTA1490.3115134536179465No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG1450.3031506763396124No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTCGCAAATCA1410.2947878990612782No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG1400.2926972047416947No Hit
GCTGCGTTCTTCATCGATGCGCGGGAACCCGTCCTCGACAAATACAAAGA1330.27806234450461No Hit
GCTGCGTTCTTCATCGATGCTACCCTTATCTGCAGCAGCTGGAATCTCTG1300.2717902615458594No Hit
GCTGCGTTCTTCATCGATGCCGACGCCGAGGCGTTCAACCACCAGGTTCC1270.2655181785871088No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG1220.2550647069891911No Hit
GCTGCGTTCTTCATCGAAACGTGCACGTTTCGTTGAAGATAATACGCACG1220.2550647069891911No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT1180.246701929710857No Hit
GCTGCGTTCTTCATCGATACGAGAACCAAGAGATCCATTGTTAAAAGTTT1140.23833915243252285No Hit
GCTGCGTTCTTCATCGATGCATAACCAAGAATACAAAAGCCGATACCTTC1110.23206706947377226No Hit
GCTGCGTTCTTCATCGATGCGACCTAGAGTGAAATAGTTGCTTGCCGGAT1030.215341514917104No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG1010.2111601262779369No Hit
GCTGCGTTCTTCATCGATGTGTTTTGGCAATGGCAACTGGACCAAAATCC980.20488804331918628No Hit
GCTGCGTTCTTCATCGATGCTGTCCATGGTCACGCGATGCTCTCCTCGAT980.20488804331918628No Hit
GCTGCGTTCTTCATCGATGCCATGAACCGTTTGCGCTACGACGACAGGCT940.19652526604085216No Hit
GCTGCGTTCTTCATCGATGCGTTGTTATTCTACTTCGCAAATCAAAATAA900.18816248876251804No Hit
GCTGCGTTCTTCATCGATGCCTTCGTAGCGGCCGCATAACAAAATCAATT880.18398110012335095No Hit
GCTGCGTTCTTCATCGATGCATTCAATATTGCTATTTACTTTGCAAATTA860.1797997114841839No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC850.17770901716460036No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTTGCAAATTA810.16934623988626624No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT800.1672555455666827No Hit
GCTGCGTTCTTCATCGATGCCTGCCAATGCTTTCAGCGGCTCGGCAAGTG680.1421672137316803No Hit
GCTGCGTTCTTCATCGATGCAAACCTCGGCCGCACCCCAAGGCCTTGCTG670.14007651941209676No Hit
GCTGCGTTCTTCATCGATGCCTGCAACAGCGCGGCTAGTTTCATTACCAC600.12544165917501202No Hit
GCTGCGTTCTTCATCGATGCGACCTAAAGTGAAATAGTTGCTCGCCGGGT560.11707888189667788No Hit
GCTGCGTTCTTCATCGATGCACGAGAGCCCGTCCTTAACAAATACAAAGA540.1128974932575108No Hit
GCTGCGTTCTTCATCGATGCAACCTAGAGTGAAATAGTTGCTTGCAGGGT530.11080679893792729No Hit
GCTGCGTTCTTCATCGAGGAAGCAATGTGGAGAATATCGGATTCGAACCG530.11080679893792729No Hit
GCTGCGTTCTTCATCGGCGCAGTCCTGGTCATTTACTACAAACAAATTTC530.11080679893792729No Hit
GCTGCGTTCTTCATCGATGCAGGTATCGAGCATGCCCTCAAGGCCTTCGA530.11080679893792729No Hit
GCTGCGTTCTTCATCGGCGCTTACTACCTAGGCATCCTTTGTGTGCCCTT520.10871610461834376No Hit
GCTGCGTTCTTCATCGATGCTGGCTCCAGGGAGCTTCTTGATGAGGTCAG520.10871610461834376No Hit
GCTGCGTTCTTCATCGATGCAGGCGACGCGAAACACGACTTCCACAAACG500.10453471597917668No Hit
GCTGCGTTCTTCATCGATTTCCAGAATCATGACTTCTACTTCGTCACCCA490.10244402165959314No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)