FastQCFastQC Report
Sun 21 May 2023
EGAF00007833674

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833674
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55549
Sequences flagged as poor quality0
Sequence length235-238
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT2253740.571387423716No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT752213.541197861347639No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG693212.479072530558605No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT26024.684152730022142No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCA14052.5292984572179518No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG13932.507695908117158No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG13362.405083799888387No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT12162.189058308880448No Hit
GCTGCGTTCTTCATCGATGCCTAACCTGGAAGCTGCGTTCTTCATCGATG7951.4311688779275955No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT6661.198941475094061No Hit
GCTGCGTTCTTCATCGATGCCCTAACCTGGAAGCTGCGTTCTTCATCGAT5961.07292660533943No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG4390.7902932546040433No Hit
GCTGCGTTCTTCATCGATGCACCTGAGCCAATTTTTGGCTTGGCGGTAAC4060.7308862445768601No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT2890.5202613908441196No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT2250.4050477956398855No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGTTG1990.3582422725881654No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT1870.33663972348737153No Hit
GCTGCGTTCTTCATCGATGCCTAACCTGGAAGCTGCGTTCTTCATCGGCT1730.3114367495364453No Hit
GCTGCGTTCTTCATCGATGCCCTAACCTGGAAGCTGCGTTCTTCATCGGC1540.2772327134601883No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGCCGAGAGTCG1510.27183207618498983No Hit
GCTGCGTTCTTCATCGATGCCGGTCGCTTTGGAAACCGCCGTGCGGACAT1470.2646312264847252No Hit
GCTGCGTTCTTCATCGATTCGAGAGCCGAGATATCCGTTGCCGAGAGTCG1460.26283101405965903No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCTGGCAAACT1300.2340276152586005No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCGCCTGTCCGAGGT1290.23222740283353438No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT1290.23222740283353438No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGTCGAGAGTCG1270.22862697798340204No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACTATCGGGCAAACT1150.20702442888260814No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAATCGTACTCCACAACAGG1120.2016237916074097No Hit
GCTGCGTTCTTCATCGGCGCTTACTACCTAGGCATCCTTTGTGTGCCCTT1050.18902230463194658No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT1040.1872220922068804No Hit
GCTGCGTTCTTCATCGATGCCCACGCCGGTACGCTCGGCACGCTCGGCGC1010.18182145493168192No Hit
GCTGCGTTCTTCATCGATGCCGATTTGTTTCTCAAAATCACCCTGACCAT910.16381933068102036No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCTTACTCCACAACAGG840.15121784370555727No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG800.1440169940052926No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGTCAAACT760.136816144305028No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACATGCGTGT670.12061423247943256No Hit
GCTGCGTTCTTCATCGATGCCTTTTCCGAGGCCGGACGATCGGGCAAACT630.11341338277916795No Hit
GCTGCGTTCTTCATCGATACGAGAACCAAGAGATCCATTGTTAAAAGTTT620.11161317035410177No Hit
GCTGCGTTCTTCATCGAAACGGATATAGCTTCCGTCTTTTCTTCTTGTTT610.10981295792903563No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG600.10801274550396947No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT590.1062125330789033No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA580.10441232065383715No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG560.10081189580370485No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)