FastQCFastQC Report
Sun 21 May 2023
EGAF00007833702

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833702
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60176
Sequences flagged as poor quality0
Sequence length235-238
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT2419340.20373570858814No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT641210.65541079500133No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG36706.098776921031641No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT29704.935522467428875No Hit
GCTGCGTTCTTCATCGATACGAGAACCAAGAGATCCATTGTTAAAAGTTT28984.815873437915448No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG20183.3534964105291145No Hit
GCTGCGTTCTTCATCGATGCGTGAGCCGAGATATCCGTTGCCGAGAGTCG15642.5990428077638925No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT12882.1403881946290877No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT10501.7448816804041478No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG9311.5471284232916778No Hit
GCTGCGTTCTTCATCGATGTGTTTTGGCAATGGCAACTGGACCAAAATCC8431.4008907205530445No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT7071.174886998138793No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG5860.9738101568731721No Hit
GCTGCGTTCTTCATCGATGCCCGCATGCCTGTTCGTCGCTACGAGGTGCT5520.9173092262696091No Hit
GCTGCGTTCTTCATCGATGTCTTCCTTTGTAGCATCAGCCGGGAAGGTCA5500.9139856421164584No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT4530.7527918106886466No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGTTG3750.623172028715767No Hit
GCTGCGTTCTTCATCGATGCCAGTATTGGTGTCATTGGTGCTATCGGTGC3040.5051847912789151No Hit
GCTGCGTTCTTCATCGATGCAGGGCGAGAGGGTGAGCTTATCTTCAGATA2560.42541877160329705No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACTATCGGGCAAACT2530.4204333953735709No Hit
GCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTTGTTGAAAGTTT2250.37390321722946024No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTA2240.3722414251528849No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT2230.3705796330763095No Hit
GCTGCGTTCTTCATCGATGCCATTGAAAGTATACCAATAGCTTTCTCTAT2230.3705796330763095No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT2220.3689178409997341No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGTCAAACT2200.36559425684658337No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT1800.2991225737835682No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT1660.2758574847115129No Hit
GCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTTGTTAAAAGTTT1460.24262164318000534No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCCGACGATCGGGCAAACT1420.23597447487370382No Hit
GCTGCGTTCTTCATCGATGTGTTTTGGCAATGGCAACTGTACCAAAATCC1410.2343126827971284No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG1380.22932730656740227No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA1340.22268013826110075No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG1330.2210183461845254No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTGAAAGTTG1300.21603296995479923No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCG1170.19442967295931932No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG1150.19110608880616856No Hit
TCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1140.1894442967295932No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTG1050.17448816804041478No Hit
GCTGCGTTCTTCATCGATGCCCACGCCGGTACGCTCGGCACGCTCGGCGC980.16285562350438712No Hit
GCTGCGTTCTTCATCGGCGCAGTCCTTGTCATTTACTACAAACAAATTTC940.15620845519808563No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT820.13626695027918106No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT770.12795798989630416No Hit
GCTGCGTTCTTCATCGATGTGTTTTGGTAAGGGTAACTGCACCAAAATAC720.11964902951342729No Hit
GCTGCGTTCTTCATCGATGCCAGCCACAAAACCTGCGGCAACAGTTGTGT700.11632544536027652No Hit
GCTGCGTTCTTCATCGATACGAGAACCAAGAGATCCGTTGTTGAAAGTTT610.10136931667109811No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)