FastQCFastQC Report
Sun 21 May 2023
EGAF00007833719

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833719
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60585
Sequences flagged as poor quality0
Sequence length247-250
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC2300937.978047371461585No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC909215.007014937690846No Hit
GGAAGTAAAAGTCGTAACAAGCGGCAAGAAGAATACGATTAGCACTTGAC38556.362961128992326No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC24083.9745811669555167No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCCTACGAGAACGTGGGGATGGATC19323.1889081455805894No Hit
GGAAGTAAAAGTCGTAACAAGCGGCAAGAAGAATACAATCAACACTTGAC19093.1509449533712965No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAAC14952.467607493604027No Hit
GGAAGTAAAAGTCGTAACAATGCGCTACATCATTGCCTTGGAACCCCTTG11671.926219361228027No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGATGAAGAACGCAGCAAGACACCC11091.8304860939176364No Hit
GGAAGTAAAAGTCGTAACAAGGCTCAAGTTGAAAAACGCTTGAACCAAGT9781.6142609556820995No Hit
GGAAGTAAAAGTCGTAACAAGGATACTAAGGCACAGTTGATTGATGTTAC9481.5647437484525875No Hit
GGAAGTAAAAGTCGTAACAAGGATACTAAGGCACAGCTGATTGATGTCAC9221.5218288355203433No Hit
GGAAGTAAAAGTCGTAACAAGGACTACAGAAAGAAACAGGGTCACAGACA8741.4426013039531238No Hit
GGAAGTAAAAGTCGTAACAAGGATATGAAGATTGTCAATATGATGCAGAC8041.3270611537509285No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC5570.9193694808946109No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC3750.6189650903689032No Hit
GGAAGTAAAAGTCGTAACAAGGCGCTACATCATTGCCTTGGAACCCCTTG3460.571098456713708No Hit
GGAAGTAAAAGTCGTAACAAGGCACCCTCGGCATCGATGAAGAACGCAGC2810.46381117438309816No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAAACAGAATCCGAAAAGAGCACA2490.41099282000495174No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGTGAACGTGCGGATGGACT1850.3053561112486589No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATC1800.2971032433770735No Hit
GGAAGTAAAAGTCGTAACAAGGCTAAGAAGGACTACAGAAAGAAACAGGG1310.21622513823553682No Hit
GGAAGTAAAAGTCGTAACAAGCGAGTTCTTGGTCGCAGCATCGATGAAGA1210.1997194024923661No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA1170.19311710819509778No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC1100.18156309317487826No Hit
GGAAGTAAAAGTCGTAACAAGGAACGTTCAGCTATCGCAGCGGGCTTCCA1040.17165965172897582No Hit
GGAAGTAAAAGTCGTAACAAGGAGGAAGTAGGCCAAGTTGAGCAGGATAT1030.17000907815465874No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACCGGAAGGTGCGGATGGATC1010.16670793100602457No Hit
GGAAGTAAAAGTCGTAACAAGGTCAGTCGTACCGTAACTTCCGACAATCA1010.16670793100602457No Hit
GGAAGTAAAAGTCGTAACAAGGATGTTAGAAGCAGATGGCTATCAGGTAC990.16340678385739044No Hit
GGAAGTAAAAGTCGTAACAAGCGGTAAGAAGAATACAATCAACACTTGAC970.16010563670875627No Hit
GGAAGTAAAAGTCGTAACAAAGATGTTAGAAGCAGATGGCTATCAGGTAC950.15680448956012213No Hit
GGAAGTAAAAGTCGTAACAAGGTTAGTCGCACCGTAACTTCCGACAATCA920.15185276883717092No Hit
GGAAGTAAAAGTCGTAACAAGGACGGCATTATTGGTTACGTTCTTGCAAT910.15020219526285383No Hit
GGAAGTAAAAGTCGTAACAAGGGCATGAACAAGGTGTGGCGACAGTCCAT860.14194932739126845No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC820.13534703309400015No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTAGGTGAACCTGCGGAAGGATC810.1336964595196831No Hit
GGAAGTAAAAGTCGTAACAAGGAGCTACTGATTTATTGGTAGCATCCTCC740.12214244449946356No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTATGTGAACCTGCGGAAGGATC690.1138895766278782No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGAAGGATC650.1072872823306099No Hit
GGAAGTAAAAGTCGTAACAAGGATGGCATCATTGGTTACGTTCTTGCAAT650.1072872823306099No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)