FastQCFastQC Report
Sun 21 May 2023
EGAF00007833723

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833723
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55455
Sequences flagged as poor quality0
Sequence length247-250
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC2331142.03588495176269No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG1006918.15706428635831No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA40947.382562438012803No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC29465.312415472004329No Hit
GGAAGTAAAAGTCGTAACAAGGAGGGGATCGTCGGCGGGTGCGGCCTTTC11482.0701469660084753No Hit
GGAAGTAAAAGTCGTAACAAGGGCTGGCAGGGGCTGTGGGAGGAGTTTGT8381.5111351546298801No Hit
GGAAGTAAAAGTCGTAACAAGGCTATTGGTGGGTGCAGATGAAAGCTGTG7701.3885132089081238No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG7141.287530430078442No Hit
GGAAGTAAAAGTCGTAACAAGGGGGCTGTTGCGGGCAGGTGTCGTTTTGT5841.0531061220809665No Hit
GGAAGTAAAAGTCGTAACAAGGTATCAGTAGGTGAACCTGCTGATGGATC5601.0098277882968172No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC4540.8186818140834912No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC4460.804255702822108No Hit
GGAAGTAAAAGTCGTAACAAGGAAGAAGTGAAATTCCTGAATAGACCAAT3900.7032729239924264No Hit
GGAAGTAAAAGTCGTAACAAGAGCAGAAGGAATTCAGAAGAGCCAGGGTG3540.6383554233162023No Hit
GGAAGTAAAAGTCGTAACAAGGCTTCGGAGTAGACCATTTAGTGAATGGA3320.5986836173473987No Hit
GGAAGTAAAAGTCGTAACAAGGCCGTAGCAGAGCTGGAGCGGCTTCACGA3320.5986836173473987No Hit
GGAAGTAAAAGTCGTAACAAGGTGCCCAAATGAAGCACGCCGGGGCGGAC2940.530159588855829No Hit
GGAAGTAAAAGTCGTAACAAGGAAGAAGTGAAATTCCTGAATAGACCGAT2600.46884861599495087No Hit
GGAAGTAAAAGTCGTAACAAGGAAAAGTGGGATAGTTTCTTCTTTGGAGA2350.4237670183031287No Hit
GGAAGTAAAAGTCGTAACAAGGTAGGAGAAGAAGAGCCCAGGTGAGGCAA2110.3804886845189793No Hit
GGAAGTAAAAGTCGTAACAACACTAAATCTTATCTCCAGCCCTCAGAAGG2080.3750788927959607No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC2050.36966910107294204No Hit
GGAAGTAAAAGTCGTAACAAGGTGGCGAGGTTGTCCCACAATCGGATTTC1490.2686863222432603No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC1210.21819493282841945No Hit
GGAAGTAAAAGTCGTAACAAGGGCAGAAGGAATTCAGAAGAGCCAGGGTG1120.20196555765936344No Hit
GGAAGTAAAAGTCGTAACAAGGCGGCAGGGTAGTAGATGGATAAGATTAG1080.1947525020286719No Hit
GGAAGTAAAAGTCGTAACAAGGGAAGGGGGCAGGCCATTGACCCCTCTGA1070.192949238120999No Hit
GGAAGTAAAAGTCGTAACAAGGGGTATCGCGATGACGTCGGTTTCGGGGG1040.18753944639798034No Hit
GGAAGTAAAAGTCGTAACAAGCCACAGAAGAAATGAACGATCGTAGGGAT1030.18573618249030746No Hit
GGAAGTAAAAGTCGTAACAAGGCGGCAAAAATATCATCGAGCTTGCCCAA990.17852312685961588No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACGGGAACGTGCGGCTGGATC920.1659002795059057No Hit
GGAAGTAAAAGTCGTAACAAGGTGCTCTATGAAAAGTACTATACAGCTGC850.15327743215219547No Hit
GGAAGTAAAAGTCGTAACAAGGGGCTGAGCGAGAGCATGGACACGGTCAC820.14786764042917683No Hit
GGAAGTAAAAGTCGTAACAAGGATGGAAAGAGGTGGGGGAGGAGAAGAGG780.14065458479848525No Hit
GGAAGTAAAAGTCGTAACAAGGAACGTTCAGCGATAGCTGCAGGTTTCCA760.1370480569831395No Hit
GGAAGTAAAAGTCGTAACAAGGCTGGTGGTGAGCAGCATGGCACATAAAA720.12983500135244794No Hit
GGAAGTAAAAGTCGTAACAAGGGATAACACATGGCTCAAGCAGAGCAAAA710.12803173744477503No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGAGCGCGGAAGTG580.1045893066450275No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)