FastQCFastQC Report
Sun 21 May 2023
EGAF00007833729

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833729
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences48511
Sequences flagged as poor quality0
Sequence length247-250
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC3047262.81461936468018No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC28985.973902826163139No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA27045.573993527241244No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCCTACGAGAACGTGGGGATGGATC10932.253097235678506No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACCGGAAGGTGCGGATGGATC9391.935643462307518No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC9331.9232751334748819No Hit
GGAAGTAAAAGTCGTAACAAGGAACTATTGAAAAAGCTGGTAATTGTCAT6811.4038053225041744No Hit
GGAAGTAAAAGTCGTAACAAGGTACGGACGCATCGATGAAGAACGCAGCC4840.9977118591659624No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC4010.8266166436478324No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC3620.7462225062356992No Hit
GGAAGTAAAAGTCGTAACAAGGCTCAAGTTGAAAAACGCTTGAACCAAGT3230.6658283688235658No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC3100.6390303230195213No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATC3000.6184164416317949No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGATGAAGAACGCAGCCAAGGTACG1820.3751726412566222No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG1780.3669270887015316No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAAC1770.36486570056275897No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAAACAGAATCCGAAAAGAGCACA1320.2721032343179897No Hit
GGAAGTAAAAGTCGTAACAAGGCACGTCGGCACACTGGAAGCCATAAGCT1270.2617962936241265No Hit
GGAAGTAAAAGTCGTAACAAGGTTCCAGACCGAAGAGATAAAGCTGCGAT1220.25148935293026325No Hit
GGAAGTAAAAGTCGTAACAAGGACTACAGAAAGAAACAGGGTCACAGACA1220.25148935293026325No Hit
GGAAGTAAAAGTCGTAACAAGGCAGAATTGCTCAAGTGGATGGTCTCTGG1210.2494279647914906No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATC1160.23912102409762737No Hit
GGAAGTAAAAGTCGTAACAAGGAACTGTTGAAAAAGCTGGTAATTGTCAT1140.23499824782008205No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC1130.2329368596813094No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCGGAAGGATC1070.2205685308486735No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG1050.2164457545711282No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC1000.20613881387726496No Hit
GGAAGTAAAAGTCGTAACAAGGACGAGGTGGACATCCGCGTGGCCATCAG960.19789326132217433No Hit
GGAAGTAAAAGTCGTAACAAGGAACGTTCAGCGATAGCTGCAGGTTTCCA860.17727937993444787No Hit
GGAAGTAAAAGTCGTAACAAGGGATACTGCCCTCCGCTATGATGAAGAAC740.15254272226917606No Hit
GGAAGTAAAAGTCGTAACAAGGTCCATTAAGTCATCAAGCTCCTTATAGA710.14635855785285812No Hit
GGAAGTAAAAGTCGTAACAAGGCGTGACCGTGGCGGCGAAAGTCGTCGGG690.14223578157531283No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGGAAACAGAATCCGAAAAGAGCACA680.14017439343654017No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTAGGTGAACCTGCGGAAGGATC670.13811300529776752No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACATGCGGAAGGATC650.1339902290202222No Hit
GGAAGTAAAAGTCGTAACAAGGAGAAATGATGTCGATCAAGAAGATTGCG630.12986745274267691No Hit
GGAAGTAAAAGTCGTAACAAGGAAGACAACTGAGGAATGGTGATGTTGCG620.12780606460390426No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGTGAACGTGCGGATGGACT580.11956051204881368No Hit
GGAAGTAAAAGTCGTAACAAGCGGTAAGAAGAACACAATCAACACTTGAC580.11956051204881368No Hit
GGAAGTAAAAGTCGTAACAAGGATACCCGTGTTGGCAACATGGCGCTCGT550.11337634763249572No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTATGTGAACCTGCGGAAGGATC520.10719218321617778No Hit
GGAAGTAAAAGTCGTAACAAGGGCGTAAGCAGAAAACAAGACAAACAACA510.10513079507740514No Hit
GGAAGTAAAAGTCGTAACAAGAGCAGAAGGAATTCAGAAGAGCCAGGGTG490.10100801879985982No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)