FastQCFastQC Report
Sun 21 May 2023
EGAF00007833730

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833730
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences48511
Sequences flagged as poor quality0
Sequence length236-238
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT2290547.216095318587534No Hit
GCTGCGTTCTTCATCGATGCGTCCGTACCTTGGCTGCGTTCTTCATCGAT749015.439797159407146No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT24395.027725670466492No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG23064.753561048009729No Hit
GCTGCGTTCTTCATCGATGCGTCCGTACCTTGGCTGCGTTCTTCATCGGC11772.4262538393354087No Hit
GCTGCGTTCTTCATCGATGGTCCGTACCTTGGCTGCGTTCTTCATCGATG8961.847003772340294No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG7881.6243738533528478No Hit
GCTGCGTTCTTCATCGACACGAGAGCCAAGATATCCATTGCCAGGAGTCA6151.2677537053451795No Hit
GCTGCGTTCTTCATCGATGTCTTCCTTTGTAGCATCAGCTGGGAAAGTCA5851.2059120611819998No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT3010.6204778297705675No Hit
GCTGCGTTCTTCATCGATGTCCGTACCTTGGCTGCGTTCTTCATCGATGT3000.6184164416317949No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT2440.5029787058605265No Hit
GCTGCGTTCTTCATCGGCGCCATGTGCCAAGGCATCCGCCTCGTGCTCTT2440.5029787058605265No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT1790.3689884768403043No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACATGCGTGT1770.36486570056275897No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT1580.32569932592607864No Hit
GCTGCGTTCTTCATCGGTCCGTACCTTGGCTGCGTTCTTCATCGGTCCGT1510.31126960895467004No Hit
GCTGCGTTCTTCATCGATGTCTTCCTTTGTAGCATCAGCCGGGAAAGTCA1280.26385768176289914No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGTGCAAACT1250.25767351734658117No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT1230.2535507410690359No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTAAAAGTTG1220.25148935293026325No Hit
GCTGCGTTCTTCATCGATGCCCGCATGCCTGTTCGTCGCTACGAGGTGCT1190.2453051885139453No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT1170.2411824122364No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG1050.2164457545711282No Hit
GCTGCGTTCTTCATCGATGCCGTACCTTGGCTGCGTTCTTCATCGATGCC990.20407742573849227No Hit
GCTGCGTTCTTCATCGATGGTCCGTACCTTGGCTGCGTTCTTCATCGGCT950.1958318731834017No Hit
GCTGCGTTCTTCATCGATGGATTTAACACCTGGAGTTTCCACTCGAGTCA760.15666549854672138No Hit
GCTGCGTTCTTCATCGATGCTCCATTCAATATCAAGTACTACAAGAAAGG690.14223578157531283No Hit
GCTGCGTTCTTCATCGATGAAGTCCTCGAGCTGGATGTCGGGATTCTGCT690.14223578157531283No Hit
GCTGCGTTCTTCATCGATGCCCGGCTTCCTTTTTCTCTTTATCGAAAAAA660.13605161715899486No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATGCGTTGCCGAGAGTCG650.1339902290202222No Hit
GCTGCGTTCTTCATCGATGCCTTCCTTAACGTGGACAAAGGATTGGTCAA630.12986745274267691No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT620.12780606460390426No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA590.12162190018758631No Hit
GCTGCGTTCTTCATCGATGCCAGCCACAAAGCCAGCAGCTACGGTTGTGT590.12162190018758631No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTTTTGAAAGTTT580.11956051204881368No Hit
GCTGCGTTCTTCATCGATGCGTCCGTACCTTGGCTGCGTTCTTCATCTGC580.11956051204881368No Hit
GCTGCGTTCTTCATCGATGCGGTACCGACTTCGAAGACTTGCAGGATGGC580.11956051204881368No Hit
GCTGCGTTCTTCATCGATGTGTTTTGGTAATGGTAACTGCACCAAAATCC570.11749912391004103No Hit
GCTGCGTTCTTCATCGATGCCCGTACCTTGGCTGCGTTCTTCATCGATGC570.11749912391004103No Hit
GCTGCGTTCTTCATCGATGCTAGGCTTTTTACTTCTTCTTTTGCTTCAGC560.11543773577126837No Hit
GCTGCGTTCTTCATCGATTCGAGAACCAAGAGATCCGTTGTTGAAAGTTT540.11131495949372307No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT540.11131495949372307No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT510.10513079507740514No Hit
GCTGCGTTCTTCATCGATGCGGCATACAAGGCCTGATGCCATGGGAAGAC510.10513079507740514No Hit
GCTGCGTTCTTCATCGATACGAGAACCAAGAGATCCATTGTTAAAAGTTT500.10306940693863248No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)