FastQCFastQC Report
Sun 21 May 2023
EGAF00007833746

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833746
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences76925
Sequences flagged as poor quality0
Sequence length236-238
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT1363817.728956776080597No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT1277716.609684757881052No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG990812.88007799805005No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG829910.788430289242768No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT797110.362040948976276No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG18312.38024049398765No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT17472.2710432239194023No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG15061.9577510562235945No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT14571.894052648683783No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA12131.576860578485538No Hit
GCTGCGTTCTTCATCGATGCGTTCAGGTGTACGGCTGCGTTCTTCATCGA10071.3090672733181672No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT8031.0438739031524213No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT7971.0360740981475463No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG7951.0334741631459212No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT5740.7461813454663634No Hit
GCTGCGTTCTTCATCGATGCTAGTGCCAAGAGATCCATTGTCAAAAGTTG4960.64478388040299No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTTGAAAGTTG4810.6252843678908027No Hit
GCTGCGTTCTTCATCGATGCGTGAGCCGAGATATCCGTTGCCGAGAGTCG4540.5901852453688657No Hit
GCTGCGTTCTTCATCGATGCGTTCAGGTGTACTGCTGCGTTCTTCATCGA3440.447188820279493No Hit
GCTGCGTTCTTCATCGATGCGTTCAGGTGTACCGCTGCGTTCTTCATCGA3340.4341891452713682No Hit
GCTGCGTTCTTCATCGATGCAGACAACGATCAAATCCAAGCCGCCCATGA3300.4289892752681183No Hit
GCTGCGTTCTTCATCGATGCGTGACTGTTGGGCCCCACTGCTGCGACTCT3220.41858953526161846No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGTTT2890.3756906077348066No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCA2830.36789080272993174No Hit
GCTGCGTTCTTCATCGATGCGTTCAGGTGTACAGCTGCGTTCTTCATCGA2720.35359116022099446No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT2410.3132921676958076No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC2190.2846928826779331No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACACGTGT1770.2300942476438089No Hit
GCTGCGTTCTTCATCGATGCCGATTTGTTTCTCAAAATCACCCTGACCAT1680.21839454013649662No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTTCTGAAAGTTT1580.2053948651283718No Hit
GCTGCGTTCTTCATCGATGCCCAGTGAAGTGCAGCGGGCAGCATCGGTCA1570.20409489762755934No Hit
GCTGCGTTCTTCATCGATGCCACCACCTCAATGCCATCTCGCTGATCTGG1550.20149496262593436No Hit
GCTGCGTTCTTCATCGATGCGTTCAGGTGTACGGCTGCGTTCTTCATCTT1520.19759506012349692No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGACAGTTA1520.19759506012349692No Hit
GCTGCGTTCTTCATCGATGCGTTCAGGTGTACGGCTGCGTTCTTCATCGG1440.18719532011699708No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG1420.1845953851153721No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT1340.17419564510887228No Hit
GCTGCGTTCTTCATCGATGCGCTCTCGCCCCTCAGCACTGATGTAGCCCT1070.13909652258693533No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAATTTT970.1260968475788105No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG960.12479688007799804No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC910.11829704257393565No Hit
GCTGCGTTCTTCATCGATGCACACATGGGGGCCACAGCAGGGGACCGCTC890.11569710757231069No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT860.11179720506987326No Hit
GCTGCGTTCTTCATCGATGTCGGAACCAAGAGATCCGTTGTTGAAAGTTT840.10919727006824831No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTGTCAAGAACGAGTTCGTAAT840.10919727006824831No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT800.10399740006499837No Hit
TCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT770.10009749756256094No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)