FastQCFastQC Report
Sun 21 May 2023
EGAF00007833752

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833752
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences93615
Sequences flagged as poor quality0
Sequence length235-238
%GC55

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG3406736.390535704748174No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1993721.29680072637932No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT34093.6415104417027186No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG33493.57741814880094No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG33223.5485766169951396No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT21752.3233456176894727No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT20342.1727287293702933No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT16591.7721518987341773No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG15521.657853976392672No Hit
GCTGCGTTCTTCATCGATGCTCATTATCTTTTTTTTTTGGTAATAGTTAT9330.9966351546226566No Hit
GCTGCGTTCTTCATCGATGCGTGAGCCGAGATATCCGTTGCCGAGAGTCG9090.9709982374619452No Hit
GCTGCGTTCTTCATCGATGCTTCTTGAATAGTAACCTTTTCTAAGCACTA7950.849222880948566No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT7410.7915398173369652No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG6910.7381295732521498No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG5390.5757624312343107No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTTG4540.4849650162901244No Hit
GCTGCGTTCTTCATCGATGCAACGCATGAGGACGCTGCGTTCTTCATCGA4390.4689419430646798No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGTTG4020.4294183624419164No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG3850.41125887945307915No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG3790.4048496501629012No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT3390.3621214548950489No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT2970.31725684986380387No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT2750.2937563424664851No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCG2720.2905517278213961No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTGAAAGTTT2700.2884153180580035No Hit
GCTGCGTTCTTCATCGATGCAACGCATGAGGAGGCTGCGTTCTTCATCGA2690.28734711317630723No Hit
GCTGCGTTCTTCATCGATGCCACCACCTCAATGCCATCTCGCTGATCTGG2680.2862789082946109No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGCTGAAAGTTG2590.2766650643593441No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG2540.27132403995086257No Hit
GCTGCGTTCTTCATCGATGCACGCATGAGGACGCTGCGTTCTTCATCGAT2510.26811942530577365No Hit
GCTGCGTTCTTCATCGATGCAGACCTGTGTCTACCCTCGTGTGACACTGG2480.26491481066068473No Hit
GCTGCGTTCTTCATCGATGCAACGCATGAGGATGCTGCGTTCTTCATCGA2350.2510281471986327No Hit
GCTGCGTTCTTCATCGATGCGCTGCTGCGTCTCGGTCTTTGCGGCCGGAC2100.22432302515622496No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG2100.22432302515622496No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC2050.21898200074774343No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT2040.21791379586604712No Hit
GCTGCGTTCTTCATCGATGCCCAGGCACCACCTCTTCCCCTTTTGATGCT1940.207231747049084No Hit
GCTGCGTTCTTCATCGATGTGAGAGCCGAGATATCCGTTGCCGAGAGTCG1740.18586764941515782No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT1720.18373123965176522No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT1710.1826630347700689No Hit
GCTGCGTTCTTCATCGATGCCCTTGCCGAGCGCCACGGTGTTTCGTACTG1660.17732201036158735No Hit
GCTGCGTTCTTCATCGATACGAGAACCAAGAGATCCATTGTTAAAAGTTT1440.15382150296426855No Hit
GCTGCGTTCTTCATCGATGCTGTGTGGGAATGTATTTAATTTCCTACCTG1410.15061688831917963No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC1350.14420765902900176No Hit
GCTGCGTTCTTCATCGATGCAACGCATGAGGAAGCTGCGTTCTTCATCGA1350.14420765902900176No Hit
GCTGCGTTCTTCATCGATGCACGCATGAGGAGGCTGCGTTCTTCATCGAT1320.1410030443839128No Hit
GCTGCGTTCTTCATCGATGCTGGGGCTGGCATTGATAGATTTGGCTACAG1200.12818458580355713No Hit
GCTGCGTTCTTCATCGATGCTGAGTAAAGCAGACTGGCCACCTGTCTTCT1190.1271163809218608No Hit
GCTGCGTTCTTCATCGATGCAGACAACGATCAAATCCAAGCCGCCCATGA1190.1271163809218608No Hit
GCTGCGTTCTTCATCGATGTCCCTGTAAAGGACATGAACTCATTCTTCTT1180.1260481760401645No Hit
GCTGCGTTCTTCATCGATGCACATGACTAAGCCTTGCTGTGGGAAAGGAT1120.11963894674998665No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGAGATCCGTTGTTGAAAGTTG1100.11750253698659403No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT1100.11750253698659403No Hit
GCTGCGTTCTTCATCGATGCCCGGCTGGGCATTTGTCAGGGCTGTGCACG1020.10895689793302356No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCTAGAGATCCGTTGTTGAAAGTTT990.10575228328793462No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTCGAAAGTTG950.10147946376114939No Hit
GCTGCGTTCTTCATCGATGCTCTCGGCAAAGGCACTCGCCTCGGCCCGGA940.10041125887945308No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)