FastQCFastQC Report
Sun 21 May 2023
EGAF00007833755

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833755
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63684
Sequences flagged as poor quality0
Sequence length247-250
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC4358668.44105269769487No Hit
GGAAGTAAAAGTCGTAACAAGGGCTGGCAGGGGCTGTGGGAGGAGTTTGT20733.2551347277181084No Hit
GGAAGTAAAAGTCGTAACAAGGGCCAGCGAATCTAATAATGAAGAATCAG19092.9976132152502983No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC10891.7100056529112493No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG9011.4147980654481502No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC8951.405376546699328No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA7931.2452107279693485No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG7931.2452107279693485No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC7741.215375918598078No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC6931.0881854154889767No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC3980.6249607436718799No Hit
GGAAGTAAAAGTCGTAACAAGGCTCAAGTTGAAAAACGCTTGAACCAAGT3960.6218202374222724No Hit
GGAAGTAAAAGTCGTAACAAGGAAGGAGCATATATGATTCAGCAGGAAAC3730.585704415551787No Hit
GGAAGTAAAAGTCGTAACAAGGTTGGCGGGATTTACACGGTTCTATCTAC3490.5480183405564977No Hit
GGAAGTAAAAGTCGTAACAAGGATGCGACTGAATAACGTGGTCGATTAAC3030.47578669681552666No Hit
GGAAGTAAAAGTCGTAACAAGGTGGGAAACACAGGGGTCGCATTGGACCG2680.4208278374473965No Hit
GGAAGTAAAAGTCGTAACAAGGAGGAAGTAGGCCAAGTTGAGCAGGATAT2520.395703787450537No Hit
GGAAGTAAAAGTCGTAACAAGGCCCTCCTGGCGGCTCACGGCCCCGAGCT2400.3768607499528924No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAAACAGAATCCGAAAAGAGCACA2200.34545568745681804No Hit
GGAAGTAAAAGTCGTAACAAGGGCGTGGGGCAGAAGGTGGAAAATGCGCG2070.3250423968343697No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAAACAGAACCCGAAAAGAGCACA2000.31405062496074365No Hit
GGAAGTAAAAGTCGTAACAAGGTATCAGTAGGTGAACCTGCTGATGGATC1880.29520758746309905No Hit
GGAAGTAAAAGTCGTAACAAGGACCGGGCAATAAGCGTGGCGGAAAGAAC1510.23710822184536146No Hit
GGAAGTAAAAGTCGTAACAAGGCAGGACAAGGAGAAAAACGATGAGCCTA1500.23553796872055774No Hit
GGAAGTAAAAGTCGTAACAAGGACAAGCAATCGGGATTTTAGCCGGTGAA1280.20099239997487592No Hit
GGAAGTAAAAGTCGTAACAAGGAGGGGATCGTCGGCGGGTGCGGCCTTTC1200.1884303749764462No Hit
GGAAGTAAAAGTCGTAACAAGGCTACTCAGAGCCCGACCCCCGCATAGAC1100.17272784372840902No Hit
GGAAGTAAAAGTCGTAACAAGGACGAGGTGGACATCCGCGTGGCCATCAG1100.17272784372840902No Hit
GGAAGTAAAAGTCGTAACAAGGCATGAGGTTGCAGGATATGGTGTTCATA1060.16644683122919415No Hit
GGAAGTAAAAGTCGTAACAAGGCGAGGACAAGCGGTGAGATAACCGATGC1050.1648765781043904No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTAGGTGAACCTGCGGAAGGATC1040.16330632497958672No Hit
GGAAGTAAAAGTCGTAACAAGTCCTTAATCGGCGGCAGCGCCGCAATGGA1040.16330632497958672No Hit
GGAAGTAAAAGTCGTAACAAGGATGTTGCGTCAAGGTTTCGGATAAAGCA1030.161736071854783No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACGGGAACGTGCGGCTGGATC1030.161736071854783No Hit
GGAAGTAAAAGTCGTAACAAGGTAGGAGAAGAAGAGCCCAGGCGAGGCAA880.1381822749827272No Hit
GGAAGTAAAAGTCGTAACAAGGTGGCAAGGTTGTCCCATAATCGGATTTC870.1366120218579235No Hit
GGAAGTAAAAGTCGTAACAAGGCAACGACGAGCACGATGCCGAGGATTTT860.1350417687331198No Hit
GGAAGTAAAAGTCGTAACAAGGAAGAAGGAGAGAAACGATGAGCCTGGAT850.13347151560831608No Hit
GGAAGTAAAAGTCGTAACAAGGTTGGCGGGATTTACACAGTTCTTTCGAC840.13190126248351233No Hit
GGAAGTAAAAGTCGTAACAAGGCAATATGCGCCAAACCTCCCCCGCACAG800.12562024998429747No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGTAAGGATC730.11462847811067145No Hit
GGAAGTAAAAGTCGTAACAAGGCGGTCGACGCAGGGGTGGACAACATCCG720.11305822498586772No Hit
GGAAGTAAAAGTCGTAACAAGGATAAAGAAGATGAAGCACATACTGTTTG680.10677721248665284No Hit
GGAAGTAAAAGTCGTAACAAAGCTGAGTTGCACAAACTCTTTTTTGATTT660.1036367062370454No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)