FastQCFastQC Report
Sun 21 May 2023
EGAF00007833758

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833758
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences85734
Sequences flagged as poor quality0
Sequence length237-238
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG2321527.07793874075629No Hit
GCTGCGTTCTTCATCGATGCGGTCCAAGGTCTGCTGCGTTCTTCATCGAT1727220.146033079058483No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT1650719.25373830685609No Hit
GCTGCGTTCTTCATCGATGCGGTCCAAGGTCTGCTGCGTTCTTCATCTCC42004.898873259150395No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT41754.8697132992745No Hit
GCTGCGTTCTTCATCGATGCGGTCCAAGGTCTGCTGCGTTCTTCATCGGC28593.3347330114073768No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA25722.9999766720320995No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT22182.587071640189423No Hit
GCTGCGTTCTTCATCGATGGGTCCAAGGTCTGCTGCGTTCTTCATCGATG4970.5797000023327968No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT4440.517880887395899No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG4360.5085497002356124No Hit
GCTGCGTTCTTCATCGATGGTCCAAGGTCTGCTGCGTTCTTCATCGATGG4320.5038841066554692No Hit
GCTGCGTTCTTCATCGATGCGGCCGCAAGCTTATCGTCGATGCGATAGAG4140.48288893554482465No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT4020.468892154804395No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT3820.4455641869036788No Hit
GCTGCGTTCTTCATCGATGCGGTCCAAGGTCTGCTGCGTTCTTCATCGCC3330.3884106655469242No Hit
GCTGCGTTCTTCATCGATGGTCCAAGGTCTGCTGCGTTCTTCATCGATGC1740.20295332073623065No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT1680.19595493036601583No Hit
GCTGCGTTCTTCATCGATGCATTCAATATTGCTATTTACTTTGCAAATTA1650.1924557351809084No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG1460.17029416567522804No Hit
GCTGCGTTCTTCATCGATGCGGTCCAAGGTCTGCTGCGTTCTTCATCTGC1350.15746378332983413No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT1180.1376350106142254No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACATACGTGT1160.13530221382415378No Hit
GCTGCGTTCTTCATCGATGTGGTCCAAGGTCTGCTGCGTTCTTCATCGAT1040.12130543308372407No Hit
GCTGCGTTCTTCATCGATGCTAGGCTTTTTACTTCTTCTTTTGCTTCAGC1010.11780623789861666No Hit
GCTGCGTTCTTCATCGATGCGTACATAAACTATGTAGGAACGCCCGCGCT990.11547344110854503No Hit
GCTGCGTTCTTCATCGATGCGGTCCAAGGTCTGCTGCGTTCTTCATCGTA980.11430704271350922No Hit
GCTGCGTTCTTCATCGATGGGTCCAAGGTCTGCTGCGTTCTTCATCTCCG960.11197424592343762No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG960.11197424592343762No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGATAGTCG960.11197424592343762No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCT950.11080784752840181No Hit
GCTGCGTTCTTCATCGATGCTGTCGTGGTGACGGTGGCCGCGGCGCTGGG940.10964144913336599No Hit
GCTGCGTTCTTCATCGATGCGGTCCAAGGTCTGCTGCGTTCTTCATCCTT930.10847505073833018No Hit
GCTGCGTTCTTCATCGATGGGTCCAAGGTCTGCTGCGTTCTTCATCGGCT880.10264305876315115No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG860.10031026197307952No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)