FastQCFastQC Report
Sun 21 May 2023
EGAF00007833763

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833763
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences154623
Sequences flagged as poor quality0
Sequence length247-250
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC12379680.06312126915141No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTTTCCGGCA44422.8727938275676967No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC37502.4252536815350885No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC35042.2661570400263864No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG20511.3264520802209243No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC13010.8414013439139066No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC11410.7379238535017429No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG10590.684891639665509No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC9090.5878814924041055No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGTGGAAGGATC5290.3421224526752165No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC4990.32272042322293576No Hit
GGAAGTAAAAGTCGTAACAAGGCCTATGAAGAACGCAGCGTCCTTGATAG4850.3136661428118715No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGAAAGGATC4480.2897369731540586No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCGGAAGGATC4470.28909023883898255No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCAGAAGGATC3960.25610678877010534No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA3340.2160092612353919No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTAAACCTGCGGAAGGATC2800.1810856082212866No Hit
GGAAGTAAAAGTCGTAACAAGGCCGATGAAGAACGCAGCGTCCTTGATAG2560.16556398465946207No Hit
GGAAGTAAAAGTCGTAACAAGGTTTTCGTAGGTGAACCTGCGGAAGGATC2440.15780317287854975No Hit
GGAAGTAAAAGTCGTAACAAGGATAACGTGGAATTTGGGACTCAGCCAAC2440.15780317287854975No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCATAGGTGAACTTGCGGAAGGATC2320.1500423610976375No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCATAGGTGAACCTGCGGAAGGATC1930.12481972280967257No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAATGATC1850.11964584828906438No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACATGCGGAAGGATC1750.11317850513830414No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC1680.10865136493277197No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGAGGAAGGATC1650.10671116198754389No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGATGAAGAACGCAGCGTCCTTGAT1620.10477095904231583No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)