FastQCFastQC Report
Sun 21 May 2023
EGAF00007833764

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833764
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences154623
Sequences flagged as poor quality0
Sequence length236-238
%GC59

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCG7665449.57477218783751No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG1999312.930159161314942No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT137478.890656629350097No Hit
GCTGCGTTCTTCATCGATGCCTATCAAGGACGCTGCGTTCTTCATCGATG75784.900952639646107No Hit
GCTGCGTTCTTCATCGATGCCCTATCAAGGACGCTGCGTTCTTCATCGAT73404.747029872658013No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCAACGCCGGACGATCGGGCAAACT39992.5862905259890185No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG31612.0443271699553107No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT18531.1983986858358717No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT11470.7418042593921991No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG9410.6085769904865381No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT7740.5005723598688423No Hit
GCTGCGTTCTTCATCGATGCCCTATCAAGGACGCTGCGTTCTTCATCGGC6450.4171436332240352No Hit
GCTGCGTTCTTCATCGATGCCTATCAAGGACGCTGCGTTCTTCATCGGCT6340.41002955575819894No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA4730.3059053310309592No Hit
GCTGCGTTCTTCATCGATGCCTATCAAGGACGCTGCGTTCTTCATCGCCT4710.3046118624008071No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCAAGATATCCGTTGCCGAGAGTCG4220.272921880962082No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTTG4210.2722751466470059No Hit
GCTGCGTTCTTCATCGATGCCCTATCAAGGACGCTGCGTTCTTCATCGCC4100.26516106918116966No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT3280.21212885534493572No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCAAGAGTCG3110.20113437198864334No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG3080.19919416904341528No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCTGAGAGTCG3030.19596049746803515No Hit
GCTGCGTTCTTCATCGATGCAAAAGCCGAGATATCCGTTGCCGAGAGTCG3010.19466702883788312No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA2780.17979213959113458No Hit
GCTGCGTTCTTCATCGATGCAAGAGTCGAGATATCCGTTGCCGAGAGTCG2650.17138459349514626No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCATTGCCGAGAGTCG2480.16039011013885388No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT2310.14939562678256146No Hit
GCTGCGTTCTTCATCGATGCAAGAGCTGAGATATCCGTTGCCGAGAGTCG2260.14616195520718134No Hit
GCTGCGTTCTTCATCGATGCCTATCAAGGACGCTGCGTTCTTCATCCTTG2240.1448684865770293No Hit
GCTGCGTTCTTCATCGATGCCAGCGCTGCGGGGTCGGGGATATCGGCGAG1930.12481972280967257No Hit
GCTGCGTTCTTCATCGATGCCCTATCAAGGACGCTGCGTTCTTCATCCTT1920.12417298849459653No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT1880.12158605123429245No Hit
GCTGCGTTCTTCATCGATGTAAGAGCCGAGATATCCGTTGCCGAGAGTCG1700.10994483356292402No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGATAGTCG1660.10735789630261994No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)