FastQCFastQC Report
Sun 21 May 2023
EGAF00007833766

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833766
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences116302
Sequences flagged as poor quality0
Sequence length235-238
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT2010817.289470516414163No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT2006717.254217468315247No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA1254010.782273735619336No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT70076.024831903148699No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG47184.056680022699523No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA46493.9973517222403743No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG41763.590651923440698No Hit
GCTGCGTTCTTCATCGATGCCGCAATGGTAGGGCATTTAGGCTCAGCAGC41263.54766040136885No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG31202.68267097728328No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT24432.1005657684304655No Hit
GCTGCGTTCTTCATCGATGCGGATACGCTGAGCACCGTGCCGCCGGACAA19211.6517342780003785No Hit
GCTGCGTTCTTCATCGATGCGATAAAGGTTGGCATCGTGTTTAATGGGTG15561.3378961668758922No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG14961.2863063403896753No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT14791.271689222885247No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG12311.0584512734088838No Hit
GCTGCGTTCTTCATCGATGCCACCACCTCAATGCCATCTCGCTGATCTGG11641.0008426338326082No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGCTGAAAGTTG10690.9191587418960981No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG9470.8142594280407903No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG8830.7592302797888256No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG6720.5778060566456295No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACATGCGTGT6540.5623291086997644No Hit
GCTGCGTTCTTCATCGATGCGTGACTGTTGGGCCCCACTGCTGCGACTCT5990.5150384344207323No Hit
GCTGCGTTCTTCATCGATGCCCACGAGCCCCATCCACTTCGCCATGAGAC5730.49268284294337156No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT5700.49010335161906077No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT5480.47118708190744785No Hit
GCTGCGTTCTTCATCGATGCACTGCGCAAGAAGGAGGCGAAAACATGGCT5250.45141098175439803No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT5240.4505511513129611No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTAAAAGTTT5180.44539216866433934No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGCTGAAAGTTT4910.4221767467455418No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT3970.34135268525046863No Hit
GCTGCGTTCTTCATCGATGCCGAGCTATCAGTTGTCAACTATGAGCAGAG3860.33189455039466215No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTCGAAAGTTG3330.28632353699850394No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG3200.27514574125982355No Hit
GCTGCGTTCTTCATCGATGCTGCTGCCAGCGAGACCCGCCGTCGCCTGCA2950.25364998022389984No Hit
GCTGCGTTCTTCATCGATGCCGCCAAAATTGGCAGGGAACTGGGCTGGAA2900.2493508280167151No Hit
GCTGCGTTCTTCATCGATTTCACCCAACAATGCTTCAGGAGAAACGACAA2790.23989269316090867No Hit
GCTGCGTTCTTCATCGATGCCATGAACCGTTTGCGCTTCGATAGCAGGCT2670.22957472786366528No Hit
GCTGCGTTCTTCATCGATGAAGTCGAGAGAAATTTGTTCTTGTCCGAGGT2630.2261354060979175No Hit
GCTGCGTTCTTCATCGATGCGCCTTGAGGTTGTCCATCGTCATCATGGCA2550.2192567625664219No Hit
GCTGCGTTCTTCATCGATGCCTGAGTGAGGTCATGCTCCCAGCCTCCGAA2320.1994806624133721No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT2240.1926020188818765No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT2180.18744303623325478No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT2120.18228405358463312No Hit
GCTGCGTTCTTCATCGATGCATCTGAGAATTTCTCGGCTTCTACGGGAGC1990.1711062578459528No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTCGCAAATCA1860.15992846210727243No Hit
GCTGCGTTCTTCATCGATGCAAAAAACGCATCCATGTCAACATGAATGAT1820.15648914034152464No Hit
GCTGCGTTCTTCATCGATGCCGACGCGGGTGTGGAAGGCGAGCGAGGCAA1730.1487506663685921No Hit
GCTGCGTTCTTCATCGATGCCTAGGCCCGAACTGAGGACAGTCTGTCCTT1720.14789083592715516No Hit
GCTGCGTTCTTCATCGATGTGTTTTGGCAATGGCAACTGTACCAAAATCC1620.13929253151278567No Hit
GCTGCGTTCTTCATCGATGCGACTATGGTAAGGCGCAGAAACAGTTTGGC1510.12983439665697924No Hit
GCTGCGTTCTTCATCGATACGAGAACCAAGAGATCCATTGTTAAAAGTTT1380.1186566009182989No Hit
GCTGCGTTCTTCATCGATGCAAGAGCAGAGATATCCGTTGCCGAGAGTCA1310.11263778782824027No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCAAGAGTCA1290.11091812694536637No Hit
GCTGCGTTCTTCATCGATGCGGGAGCCAAGAGATCCGTTGTTGAAAGTTG1210.10403948341387079No Hit
GCTGCGTTCTTCATCGATGCACACATGGGGGCCACGTCAGGTGACCACTC1180.10145999208955993No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)