FastQCFastQC Report
Sun 21 May 2023
EGAF00007833774

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833774
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences80368
Sequences flagged as poor quality0
Sequence length236-238
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT3046937.91185546486164No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG79749.921859446545888No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA48596.045938682062513No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT36054.485616165638065No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC34374.276577742385029No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT28743.5760501692215807No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG21432.6664841728050965No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG16272.0244375870993427No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT13061.6250248855265776No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG12311.5317041608600437No Hit
GCTGCGTTCTTCATCGATGCAGAGCATACCGTTGTCACCGTTCCTCCGGC10311.28284889508262No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT10051.250497710531555No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACATGCGTGT9841.2243679076249254No Hit
GCTGCGTTCTTCATCGATGCTCCATGTTATATGGATTTCATAACTAATAC8871.1036731037228746No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT8301.032749352976309No Hit
GCTGCGTTCTTCATCGATGCCGCCAGGCAGACCTACGAATACGCCGAAGT7520.9356957993231138No Hit
GCTGCGTTCTTCATCGATGCCCACCATCACCACCAAATCCTTTCGGCCCT6950.8647720485765479No Hit
GCTGCGTTCTTCATCGATGCCGAATTCTTCGGCGTAGGCAAGGATGGGCA4630.5760999402747362No Hit
GCTGCGTTCTTCATCGATGCAACCTAGAGTGAAATAGTTGCTTGCAGGGT3910.48651204459486364No Hit
GCTGCGTTCTTCATCGATGCAACCAACCTTGGGGCTGCGTTCTTCATCGA3820.47531355763487954No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGATATCCGTTGTTAAGAGTCG3740.46535934700378256No Hit
GCTGCGTTCTTCATCGATGCCCGCATGCCTGTTCGTCGCTACGAGGTGCT3400.42305395182162053No Hit
GCTGCGTTCTTCATCGATGCCGGTCGCTTTGGAAACCGCCGTGCGGACAT3300.41061118853274936No Hit
GCTGCGTTCTTCATCGATGCAACCAACCTTGGCGCTGCGTTCTTCATCGA2800.3483973720883934No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTCGAAAGTTG2670.33222177981286083No Hit
GCTGCGTTCTTCATCGATGCCCACGCCGGTACGCTCGGCACGCTCGGCGC2580.3210232928528768No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCG2450.3048477005773442No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT2360.2936492136173601No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCATTGCCGAGAGTCG2270.2824507266573761No Hit
GCTGCGTTCTTCATCGATGCTGTCCATGGTCACGCGATGCTCTCCTCGAT2080.2588094764085208No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCTTTGCCGAGAGTCA1920.23890105514632692No Hit
GCTGCGTTCTTCATCGATGCAACCAACCTTGGTGCTGCGTTCTTCATCGA1790.22272546287079434No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA1740.21650408122635875No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTG1720.21401552856858452No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG1710.21277125223969742No Hit
GCTGCGTTCTTCATCGCTGTCAGATGCCTTGGCATCCTTCGTATGCCCTT1670.20779414692414894No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGCCGAGAGTCG1540.19161855464861635No Hit
TCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1490.18539717300418077No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTA1400.1741986860441967No Hit
GCTGCGTTCTTCATCGATGCAACCAACCTTGGAGCTGCGTTCTTCATCGA1330.16548875174198685No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG1300.16175592275532552No Hit
GCTGCGTTCTTCATCGACTCCTGACGCCAAGGCATCCACCGTATGCCTTT1180.14682460680868006No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT1170.14558033047979296No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC1160.14433605415090583No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT1130.14060322516424448No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG1130.14060322516424448No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT1100.13687039617758312No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTTTTGAAAGTTT1090.135626119848696No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGTTT1070.13313756719092176No Hit
GCTGCGTTCTTCATCGATGCCAACTTAGGCTTTCTATACAATATGCGCAA1070.13313756719092176No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT970.12069480390205056No Hit
GCTGCGTTCTTCATCGATGCCGAAGCGACCGGCGTCAGCGGACATGCCGC960.11945052757316346No Hit
GCTGCGTTCTTCATCGATGCGTCCCTCGGAGCAAATCAAGCGCTGCACAA960.11945052757316346No Hit
GCTGCGTTCTTCATCGATGCGTGACTGTTGGGCCCCACTGCTGCGACTCT950.11820625124427633No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT940.11696197491538922No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)