FastQCFastQC Report
Sun 21 May 2023
EGAF00007833778

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833778
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62542
Sequences flagged as poor quality0
Sequence length235-238
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT2090533.42553803843817No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG749911.990342489846823No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT683910.935051645294362No Hit
GCTGCGTTCTTCATCGATGCCTAACCTGGAAGCTGCGTTCTTCATCGATG22433.5863899459563178No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT20383.2586102139362345No Hit
GCTGCGTTCTTCATCGATGCCCTAACCTGGAAGCTGCGTTCTTCATCGAT18692.988391800709923No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG17592.812509993284513No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG17522.8013175146301683No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG14302.2864634965303314No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT12101.9346998816795116No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCACCGTTTGTAGTTG11421.8259729461801668No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT11011.7604169997761505No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA8721.3942630552268875No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT7061.1288414185667233No Hit
GCTGCGTTCTTCATCGATACGAGAGCCAAGAGATCCACCGTTTGTAGTTG5810.9289757283105753No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG5450.8714144095168047No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA4350.6955326020913946No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT4250.6795433468709028No Hit
GCTGCGTTCTTCATCGATGCCTAACCTGGAAGCTGCGTTCTTCATCGGCT3650.5836078155479518No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT3550.5676185603274599No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG3240.5180518691439353No Hit
GCTGCGTTCTTCATCGATGCCCTAACCTGGAAGCTGCGTTCTTCATCGGC2920.4668862524383614No Hit
GCTGCGTTCTTCATCGATGCCCACGCCGGTACGCTCGGCACGCTCGGCGC2220.3549614658949186No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATCGTTGAAAGTTT2050.3277797320200825No Hit
GCTGCGTTCTTCATCGATGCGTGACTGTTGGGCCCCACTGCTGCGACTCT1730.27661411531450864No Hit
GCTGCGTTCTTCATCGATGCTACCCTTATCTGCAGCAGCTGGAATCTCTG1540.24623453039557416No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTCGCAAATCA1540.24623453039557416No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT1520.2430366793514758No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTGAAAGTTG1510.24143775382942664No Hit
GCTGCGTTCTTCATCGATGCATTCAATATTGCTATTTACTTTGCAAATTA1480.2366409772632791No Hit
GCTGCGTTCTTCATCGATGCAGAGCTCCCTGGTCCTTGCAGTTGCTCTGC1460.2334431262191807No Hit
GCTGCGTTCTTCATCGAGGTATCTGCGACGCTGATTTTCATCTTGGATAA1360.2174538709986889No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT1210.19346998816795113No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTTGCAAATTA1160.18547536055770522No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGGGTGAATACTGTAATGTCTTC1110.1774807329474593No Hit
GCTGCGTTCTTCATCGATGCCACCACCTCAATGCCATCTCGCTGATCTGG1040.16628825429311503No Hit
GCTGCGTTCTTCATCGATGCCGCTGGTGAAAGAAAACCGTCGCGACACAG1010.16149147772696748No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG1000.1598925522049183No Hit
GCTGCGTTCTTCATCGAAACGGATATAACTACCATCTTTTCTTCTGGTCT930.14870007355057402No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA920.14710114802852484No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT850.13590866937418056No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG830.1327108183300822No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC820.131111892808033No Hit
GCTGCGTTCTTCATCGATGCGGAACTTCGCGGACTCAATGCGCGCCTGCA780.12471619071983628No Hit
GCTGCGTTCTTCATCGATGCGACCTAAAGTGAAATAGTTACTTGCAGGGT730.11672156310959035No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT720.11512263758754117No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTG720.11512263758754117No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT690.11032586102139362No Hit
GCTGCGTTCTTCATCGATGCAGACCTGTGTCTACCCTCGTGTGACACTGG680.10872693549934445No Hit
GCTGCGTTCTTCATCGATGCATTCAATATTGCTATTTACTTCGCAAATTA660.10552908445524607No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTCCACTTCGCAAATCAAAATAA650.10393015893319689No Hit
GCTGCGTTCTTCATCGATGCCTAACCTGGAAGCTGCGTTCTTCATCCTTG640.10233123341114772No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)