FastQCFastQC Report
Thu 12 Jan 2023
EGAF00007833886

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833886
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences119964895
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGGCCCAAAGAGGGACTT12810911.0678882351374541No Hit
CAGACGCGGCTACTCACAACCTAG12448511.0376793977938297No Hit
CAGACGCGGGGAGTAACGTTACTT8892010.7412176703859908No Hit
CAGACGCGCCATAAGGATTTGGAG8867870.7392054150507946No Hit
CAGACGCGTGCTTGATGGGCATGG7762110.6470317837564064No Hit
CAGACGCGCGCTTTAACAAGCCTA7004330.5838649714985372No Hit
CAGACGCGGGATTGGCTATGGACG6718250.5600179952643647No Hit
CAGACGCGAATTTGCTGGATGACA6698970.5584108584432137No Hit
CAGACGCGCTGCACCACAAGAACA6588470.5491998305004143No Hit
CAGACGCGCCATCACGACCTTTGG6351100.5294132087557781No Hit
CAGACGCGGAAGTTTGAAGGAATG6306120.5256637785578856No Hit
CAGACGCGTATGGCTTGCCCGTAG5705570.47560330044885213No Hit
CAGACGCGTATGACAACTTCATCG5429530.45259323571283083No Hit
CAGACGCGTGCTGTGCTAGGTATA5199380.4334084566989368No Hit
CAGACGCGTTCCGGCACCTAGCTT5108390.4258237378526443No Hit
CAGACGCGGCGGTGTACAGCCTAA4959180.4133859326097022No Hit
CAGACGCGAACTTCGCTTGAAGTG4716980.39319669308258887No Hit
CAGACGCGGTTTAACTGACCGTTG4523680.3770836460116103No Hit
CAGACGCGAGAGGATGACAGAATC4407600.36740748199712925No Hit
CAGACGCGCCATGATTGTGGTGAG3893220.32452993852910056No Hit
CAGACGCGGTGACCTTGTCACGGC3842270.3202828627491401No Hit
CAGACGCGTTGCGCGTGTTTGGAC3715140.3096855959403791No Hit
CAGACGCGTAGAAACTGTCCTTAT3419100.2850083768255705No Hit
CAGACGCGCTAACAGGAGCCTTTA3272680.27280313961846925No Hit
CAGACGCGCCGATTATGCTTCACC3161260.2635154225742456No Hit
CAGACGCGTCGCAACCTTGAGCAA2951560.24603530891266148No Hit
CAGACGCGTATCTGTGATTGTGGA2947340.2456835393387374No Hit
CAGACGCGTCATGGAGATTCCTGG2936000.24473826280596503No Hit
CAGACGCGGGATTAGTGATCACAT2889490.24086129529809533No Hit
CAGACGCGACCTTTAACATTCAGG2744800.22880026694475913No Hit
CAGACGCGGCCATAAACACGCGGT2569800.21421266613037088No Hit
CAGACGCGGCGTGACACCCGGATA2487810.20737816675453266No Hit
CAGACGCGCTTAGTGTGAGCCTTG2431290.20266678848007993No Hit
CAGACGCGATACCTGCTAGTCCCG2408160.2007387244410125No Hit
CAGACGCGAGCCACTTGAATCGAG2353190.1961565506309158No Hit
CAGACGCGCGCAAGGCTAGGCGAT2292450.191093402782539No Hit
CAGACGCGCCTCTGTTGAACCGTC2123900.17704345925530965No Hit
CAGACGCGCTACTAACTTCAGGTC2121910.17687757739462032No Hit
CAGACGCGTCAACAAACAAATAGG2118070.17655748375389316No Hit
CAGACGCGCCTAATTGACACTAAG2102730.17527877634536337No Hit
CAGACGCGGCTATACCTGTGAGAC2053170.17114756779472862No Hit
CAGACGCGTCCTTAAGATTCATCA1959870.1633702926176862No Hit
CAGACGCGGTGCACTTGTAGCCCG1943190.16197988586577766No Hit
CAGACGCGAGTCGAGCTACCTGAT1827220.1523128912003799No Hit
CAGACGCGACGGTGTGATTATTCG1798820.14994553198250204No Hit
CAGACGCGCGACAAACTTGACTAT1772220.14772821665871505No Hit
CAGACGCGTCGAAGCACCTTGCTA1762780.14694131979192745No Hit
CAGACGCGATATCAGGACATAACG1701750.14185399820505826No Hit
CAGACGCGTTTAGCTGAACCTTGT1677690.1398484114873772No Hit
CAGACGCGCGCGAAATGGAGCATA1672950.13945329589960465No Hit
CAGACGCGGCACAAATGCGACACC1623330.13531708588583352No Hit
CAGACGCGGTGGTGCACATAACGC1615660.13467773218156862No Hit
CAGACGCGTACGGACACCAAACTA1615250.1346435555168035No Hit
CAGACGCGGTAGGATTGTGAGTAA1588910.1324479131999407No Hit
CAGACGCGTGAGTGACTGGACCCT1489910.12419549902494392No Hit
CAGACGCGAGGCGGTTGTGGTTCA1487270.123975434646944No Hit
CAGACGCGTGTATTGCTTGATTAC1471860.12269089219808846No Hit
CAGACGCGTCTCAAACTTTATCCC1436840.11977170488083201No Hit
CAGACGCGAGCTGTAACGCAATGT1424140.11871306185030212No Hit
CAGACGCGACCCTCAACTGATGAT1415890.1180253606690524No Hit
CAGACGCGTGGAGCGCTGTGATTC1400490.11674165179738623No Hit
CAGACGCGCCATCACGACAACTAG1399370.11664829115217415No Hit
CAGACGCGCGTCAAGACCTAGTAA1382730.11526121870902317No Hit
CAGACGCGTTTGCAACTAAATGAC1360210.11338400287850875No Hit
CAGACGCGATATCAGGACACAAAC1350500.11257459942760756No Hit
CAGACGCGACGGCTCCTTTAAGTC1298930.10827584186190468No Hit
CAGACGCGGGGCGATTGTTCCTCG1297110.10812413081343504No Hit
CAGACGCGGTCCTCCTGGACTAAG1241360.10347693798256564No Hit
CAGACGCGCGTTGCACTGACCAGA1237150.10312600198583094No Hit
CAGACGCGGAGCAATTGTGCGCGT1229670.10250248624816452No Hit
CAGACGCGGTAGCTAACGCTTGAA1202780.10026099718588508No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)