FastQCFastQC Report
Thu 12 Jan 2023
EGAF00007833916

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833916
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences122893531
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGGCGTTTGTGCAAACCT8037380.6540116419960299No Hit
CAGACGCGCGCACACTGCTCCTAC6690230.5443923651278276No Hit
CAGACGCGTGGTGCGGATGCCTCA6058830.4930145590820399No Hit
CAGACGCGCCACTTGGAACGCGTA5483950.44623585597845666No Hit
CAGACGCGCCAGAAACTGCCAGCT5093360.41445306018589373No Hit
CAGACGCGTGGGTTAGAAACCGGT4719390.38402265453663303No Hit
CAGACGCGCGCAGGACTTGTGTTA4403670.3583321240887773No Hit
CAGACGCGTAACGTGGAGATTATG4344840.3535450535634785No Hit
CAGACGCGGCATAGCGAGTAATTG4122120.33542204918825225No Hit
CAGACGCGGGCTTCATGCGAGTGA3788160.308247307175184No Hit
CAGACGCGGTGACCTTGTTTAGCG3751900.30529678571933944No Hit
CAGACGCGCTTCCTCACCTACGGA3703840.30138608353599994No Hit
CAGACGCGCGACTTATGTGGGTGA3619930.29455822210853394No Hit
CAGACGCGGCGTCTATGGCTGAGG3219040.2619373024606153No Hit
CAGACGCGGATTAGTGATTGTTTG3017950.2455743581816361No Hit
CAGACGCGAATTGTGGATTAGCTT2819880.22945715507189712No Hit
CAGACGCGAGCTTGTCTCCATCCC2663130.2167022119333523No Hit
CAGACGCGCCAACCTGACTATGTT2643420.21509838463344338No Hit
CAGACGCGGGAGCTTGACTAATTC2636840.21456296182099285No Hit
CAGACGCGGTGGTGACTTGACTTA2571780.2092689484200759No Hit
CAGACGCGTAACCGTTGTTGCGGC2543800.20699218089843965No Hit
CAGACGCGACTATGTTGGGCGTGA2250480.18312436640786242No Hit
CAGACGCGCCTCGCAACTTGGACG2231120.18154901904478601No Hit
CAGACGCGGGATCCAGATTGCGCT2163250.17602635243672834No Hit
CAGACGCGTTAGTGCTGAGAAGCT2067710.16825214339394318No Hit
CAGACGCGTCCAATACTACGGATG2063820.1679356092388622No Hit
CAGACGCGGTAGGTGCTATGTCCA2056850.16736845163965547No Hit
CAGACGCGCGAATATACTAAGCAT2012470.16375719564929744No Hit
CAGACGCGGGAGAAACTTGTTGTA1910320.15544512265661892No Hit
CAGACGCGGCGGTGTACCGACTCC1908710.15531411494718952No Hit
CAGACGCGTTGCATCACGTGGTTA1858890.15126019936720672No Hit
CAGACGCGCATCGTTACCTGATTC1733050.14102044150721002No Hit
CAGACGCGCAATGAATGATTAGCT1731680.14090896289732288No Hit
CAGACGCGTTGGTAAACAAGCTAC1720730.14001794773070683No Hit
CAGACGCGGAGCAATTGCATGTTG1673520.13617641110824621No Hit
CAGACGCGGGCTGATGAAGGATTT1670980.13596972813809052No Hit
CAGACGCGCAGGTTCCTAGTCCCG1665530.1355262548359848No Hit
CAGACGCGGCCAGCAACCTTGCTA1656780.13481425641517292No Hit
CAGACGCGTGCAGGATGTTCCTGC1646000.13393707436073263No Hit
CAGACGCGCGCAATCCTATTAGCC1642390.13364332415511765No Hit
CAGACGCGCAGTTTACTAACCAAA1586730.12911420048627295No Hit
CAGACGCGAATGAGGGAGCTTAGG1560560.12698471492368463No Hit
CAGACGCGCTAGTGCCTCATTGCG1514940.12327255858569156No Hit
CAGACGCGGGGTTAATGTTCGGGC1513950.12319200105007969No Hit
CAGACGCGTGGTCATTGTAACCTG1467740.11943183567571183No Hit
CAGACGCGGGATCCAGAGGATATT1451510.11811118031916587No Hit
CAGACGCGGGTGAGGGAGGCGGAA1433400.11663754701620543No Hit
CAGACGCGTACCTCAACCCGGAAT1425830.11602156666814302No Hit
CAGACGCGCTGGCAGGATACTTGT1423660.11584499105978166No Hit
CAGACGCGCTACCGGTGGAAACTG1351200.10994883042297807No Hit
CAGACGCGACCTAAAGATTAGTGG1327440.10801544956829337No Hit
CAGACGCGGATTACGACGCCTTTG1317400.10719848223744177No Hit
CAGACGCGTAAGGTTACAATTGGC1284520.10452299560015084No Hit
CAGACGCGCAGGAATCTTTACTAG1264850.10292242315016564No Hit
CAGACGCGGCTCATTGAGGGTTTG1237290.10067983155272835No Hit
CAGACGCGCCTGCAACTAAAGGCC1229610.10005490036737572No Hit
CAGACGCGTAGAGATTGTGGTTAC1229230.10002397929310047No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)