FastQCFastQC Report
Thu 12 Jan 2023
EGAF00007834062

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007834062
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences106263883
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAAGTGGTCTAGCAGT2391440.22504730040779708No Hit
TACCTATTCCAGAGAG2375010.22350114949215624No Hit
GCGCCAAGTTTGAAGA2093090.19697096896035693No Hit
ATTGTCTCAATTCTCT2062100.19405464413529855No Hit
GTCACTCTCGGTCTAA1922160.18088554132733883No Hit
AACAGTCGTCAGCTTA1870420.1760165304706586No Hit
GCGTTGGGTTTCTTAC1781970.16769291218164875No Hit
TCCATCGGTAACGTAA1768820.16645542681703057No Hit
AACCAACGTAACGGAC1724170.16225362289838402No Hit
GGAGTAGAGCTGAATA1693230.1593420033408717No Hit
ATGCATGAGGGAGATA1645900.15488799708175544No Hit
TCCCACATCGCGCTGA1627280.15313575544759644No Hit
TCTAGTTCAGTGCGAA1616630.15213353346028208No Hit
GGAGGATGTTCTTAGG1611640.15166394775918363No Hit
GGTCATAAGTCCGGAA1573320.14805783071187037No Hit
CATAACGGTAGGGTCA1559110.14672059367527535No Hit
ACTAGGTAGCCTCGCA1551880.14604021198811265No Hit
GCCTAGGCAGATAAGT1547910.14566661374495415No Hit
TCGATTTCACATTGCA1516620.14272205731461932No Hit
CCTATTATCTGTCGGG1486510.13988854519837188No Hit
GCACCTTCAAGTTGCT1452150.1366550853407079No Hit
GCAACCGAGCGGACAT1420600.13368606151913345No Hit
CAGCCTTTCGAACACT1413690.13303579354426565No Hit
CGCAGGTGTAGATTAG1371240.12904102139764648No Hit
AATGCCAAGCGATACG1336750.1257953278443627No Hit
TGACAACTCCGCGATG1298770.12222120661636278No Hit
TGTGTCCTCCTGACCT1290550.12144766063178776No Hit
GTAGGAGAGACCGCAA1239010.1165974708452918No Hit
AGTCCGGTCTCCAACC1213320.11417990438011756No Hit
ACAAGCTCATGGGTGA1202520.11316356659016498No Hit
GAAAGTACAAGGTTCT1193850.11234767319767526No Hit
TCTATTGGTTACGCTA1184930.11150825346745517No Hit
TCAAAGCCAATTAGGA1177600.11081846124520031No Hit
GTGTCAAAGGTCTTGT1170930.11019077855455367No Hit
TCACCTGTCGCTATTT1170840.11018230907297072No Hit
AGCTATGGTCACATTG1136120.10691497128897502No Hit
TTACGTTTCCTAGAGT1095850.10312534880736476No Hit
CACTAAGCAATTCAGC1077350.10138439981531636No Hit
GCAAAGGCATCGAGTT1068480.10054968535264235No Hit
TCACTCGTCTCATATC1063090.10004245751117527No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)