FastQCFastQC Report
Thu 12 Jan 2023
EGAF00007834068

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007834068
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62258694
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCATACCAGGGATCCA1992770.32007899169873366No Hit
TCACCTGGTCCAAGTT909980.1461611128559812No Hit
CCGTGAGCACGTGAAG893110.14345145113387697No Hit
GGAACCCCAGGGTAAC882590.14176172728583097No Hit
TCTAGTTGTTGGGAAC743800.11946925838180929No Hit
CGCACAGGTCTGGTCG694330.11152338017241414No Hit
TGACTCCTCACTCCCA673560.10818729991348677No Hit
TAACAGCAGACTAGCG633920.10182031765716126No Hit
TGCGTAAGTCAACTGT629240.10106861541297348No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)