FastQCFastQC Report
Thu 12 Jan 2023
EGAF00007834071

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007834071
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences101317277
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAAGTGGTCTAGCAGT2343310.2312843445249718No Hit
TACCTATTCCAGAGAG2323240.22930343854385268No Hit
GCGCCAAGTTTGAAGA2054350.20276403598963677No Hit
ATTGTCTCAATTCTCT2027800.20014355498322364No Hit
GTCACTCTCGGTCTAA1886040.1861518643064203No Hit
AACAGTCGTCAGCTTA1855080.1830961169633487No Hit
GCGTTGGGTTTCTTAC1750150.17273954174666575No Hit
TCCATCGGTAACGTAA1734030.17114850017139724No Hit
AACCAACGTAACGGAC1686360.16644347834180345No Hit
GGAGTAGAGCTGAATA1658730.16371640149784128No Hit
ATGCATGAGGGAGATA1619390.15983354941526903No Hit
TCCCACATCGCGCTGA1594020.15732953423136312No Hit
TCTAGTTCAGTGCGAA1589050.15683899597893852No Hit
GGAGGATGTTCTTAGG1581240.15606815015369985No Hit
GGTCATAAGTCCGGAA1538110.15181122564121025No Hit
CATAACGGTAGGGTCA1519730.14999712240588542No Hit
ACTAGGTAGCCTCGCA1519180.1499428374886151No Hit
GCCTAGGCAGATAAGT1512250.14925884753100893No Hit
TCGATTTCACATTGCA1481560.1462297491473246No Hit
CCTATTATCTGTCGGG1461420.14424193417673475No Hit
GCACCTTCAAGTTGCT1423470.14049627488508204No Hit
GCAACCGAGCGGACAT1398890.13807023258234624No Hit
CAGCCTTTCGAACACT1385320.13673087562351285No Hit
CGCAGGTGTAGATTAG1346340.13288355548679026No Hit
AATGCCAAGCGATACG1312610.12955440956037537No Hit
TGACAACTCCGCGATG1268600.12521062918025325No Hit
TGTGTCCTCCTGACCT1264790.12483458275334422No Hit
GTAGGAGAGACCGCAA1213960.11981766939907001No Hit
ACAAGCTCATGGGTGA1195030.11794928124647487No Hit
AGTCCGGTCTCCAACC1194120.11785946438335487No Hit
GAAAGTACAAGGTTCT1172700.11574531360529952No Hit
TCAAAGCCAATTAGGA1165100.11499519474847315No Hit
TCTATTGGTTACGCTA1163900.11487675492897426No Hit
TCACCTGTCGCTATTT1148570.1133636862348758No Hit
GTGTCAAAGGTCTTGT1140220.11253954249086265No Hit
AGCTATGGTCACATTG1115060.11005625427536905No Hit
TTACGTTTCCTAGAGT1077330.10633230895062448No Hit
CACTAAGCAATTCAGC1052290.10386086471708077No Hit
GCAAAGGCATCGAGTT1046810.10331998954136914No Hit
TCACTCGTCTCATATC1020920.10076465043568038No Hit
ACCTGCTTCAAGTTGC1019150.1005899517019195No Hit
AGGACGACACTCAAGT1016800.10035800705540082No Hit
TAAACCGCACGGTTAT1015310.10021094427952304No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)