FastQCFastQC Report
Thu 12 Jan 2023
EGAF00007834080

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007834080
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65823261
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCTAGTAGTCAGGAC2129520.32352089028223624No Hit
GACCTTCGTACGGTTT1748200.26559000168648583No Hit
CTTTGCGCATCTGCAA1239610.18832400296910237No Hit
GTGGCGTGTATGTCCA1028900.15631252301523013No Hit
GGTTGCGCACACACCG1006960.15297935482108674No Hit
ACAGCGCGTGATAACA975660.1482241969142185No Hit
AGTTTGGCAAGCCTTA955910.14522373785157802No Hit
CTTGTCGGTCCTCAGG953280.1448241830498188No Hit
AAACTCGGTCTCTAAG935820.14217162531646677No Hit
CCTCCCTAGAGAGGTA869980.13216908229447946No Hit
TTGAGCAAGGATTGCG848100.12884502941900736No Hit
GGGTCTGCAAAGCATA815890.1239516225122909No Hit
AGCCTCTAGTCTGTGT801360.12174419617405464No Hit
ACATGGTGTCACCGCA788190.11974338372570147No Hit
ATGCATGAGTATGGGC713640.10841760027659522No Hit
GAACCGCGTTTCACCC709940.10785548895853093No Hit
ATCCCTGTCCGGACTG709760.10782814300251699No Hit
ACTAACGTCTCTGTTA675820.10267191107411103No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)