FastQCFastQC Report
Thu 12 Jan 2023
EGAF00007834083

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007834083
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences83918928
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACAGAAAAGTACCTCA3043520.3626738415914941No Hit
TGTAAGCTCTCCAACC2826340.3367941020409603No Hit
CACCACTAGACAGCTG2193570.26139156591704793No Hit
CTTAATCAGTTCAACC1028540.12256352941019456No Hit
ACAATCGCAGAGCCAA1001380.11932707243352775No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)