FastQCFastQC Report
Thu 12 Jan 2023
EGAF00007834086

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007834086
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences98632649
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCTAGCCACACTAGT2701410.2738859827236314No Hit
TTGCGGGTCGAACCGC2558580.2594049765407801No Hit
ACTTCCGAGAATCAAC2186760.22170751999168148No Hit
CGCGCAATCTGTGTGA1942640.19695709480539247No Hit
GCCTAGGGTCACCGCA1626320.16488657827693545No Hit
TTCTAACAGCATACCT1623290.16457937776770043No Hit
CAAGCTACAGGCATTT1023850.10380437009250354No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)