FastQCFastQC Report
Thu 12 Jan 2023
EGAF00007834095

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007834095
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences83751902
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACAGAAAAGTACCTCA3061860.3655869212379201No Hit
TGTAAGCTCTCCAACC2827740.3376329292199239No Hit
CACCACTAGACAGCTG2194400.2620119600388299No Hit
CTTAATCAGTTCAACC1026800.12260020076917179No Hit
ACAATCGCAGAGCCAA989900.11819433067920058No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)