FastQCFastQC Report
Thu 12 Jan 2023
EGAF00007834098

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007834098
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences98220527
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCTAGCCACACTAGT2678970.2727505218944712No Hit
TTGCGGGTCGAACCGC2539570.25855796925219104No Hit
ACTTCCGAGAATCAAC2178680.22181514053574566No Hit
CGCGCAATCTGTGTGA1936040.19711154675437653No Hit
TTCTAACAGCATACCT1620750.1650113321016899No Hit
GCCTAGGGTCACCGCA1620120.16494719072317746No Hit
CAAGCTACAGGCATTT1017660.10360970675712215No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)