FastQCFastQC Report
Wed 4 Jan 2023
EGAF00007834110

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007834110
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66328888
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGGCGTGTCAATCCA4619220.6964114941893794No Hit
CAACCAACATTGCCTC4243990.6398403663875686No Hit
AGATAGAAGGCGTCCT4216340.6356717453185707No Hit
ATCCAGAGTTTCGTTT3598460.5425177639040172No Hit
TGGTCCTAGTGAATAC3472820.5235757909886866No Hit
TACTCGCGTTGTCGGC3223160.48593608263114557No Hit
CAATCCCCATCTGCAA2947830.4444262656717538No Hit
GTTGGTATCGAGGCTC2248150.3389397995033476No Hit
GCTGCGAAGAGTTTGA1769440.26676762619629624No Hit
GTTACTTAGTACTCTG1528400.23042750241795096No Hit
GCACGGTCACTAGCCG1442340.2174527635681153No Hit
TGTACAGCATGTATCG1389740.20952258388532008No Hit
GGATAGGTCGGGTCCA1346880.20306084431869265No Hit
CAGCTGGAGGAGGCGA1168150.17611481742314147No Hit
CCCTGATTCTTCCACG1009400.15218105269607415No Hit
TTCGATTCAAGGTCGA1005800.15163830275580678No Hit
CTTCCAGCACAGTTAC955560.14406392581163127No Hit
GCTTGCTAGTGAAACT940140.14173914690081946No Hit
TCTAGTTCAGGTAGGT893860.13476179489093804No Hit
GCCCAGAGTGCGACCT857350.12925740591339327No Hit
AAACGAATCCACCTAC837550.12627228124192283No Hit
CCAGATAGTCAGCTTA828930.12497269666272712No Hit
TGTAAGCTCTGATCTT811430.12233432889753858No Hit
GGTTGCGTCACCCGGA801110.12077844573543882No Hit
TGCTCACCACTAGGAG793870.11968691530001227No Hit
TTGCGAAAGATGAGGA771260.11627814414738868No Hit
TTGACGACAAATAGTG758810.11440113393729742No Hit
GCATTGAAGATGGCAC758540.11436042769177737No Hit
CTAGCGGAGCAGGACT746590.11255879941783435No Hit
TAGCCCTCAGACTAAA718490.10832233460630306No Hit
GCGAGTCCAGATTAAG717860.10822735336675628No Hit
TGGCAATAGGGACGTT709380.10694887572968206No Hit
TACATGGTCGATGTAC679420.10243199011567931No Hit
GTCTACCGTGTGACCC674800.10173546102566955No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)