FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007834129

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007834129
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25444248
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCATACCAGGGATCCA850300.3341816193585285No Hit
TCACCTGGTCCAAGTT385970.15169243752065298No Hit
CCGTGAGCACGTGAAG381570.14996316652785335No Hit
GGAACCCCAGGGTAAC370190.14549064291465796No Hit
TCTAGTTGTTGGGAAC316990.12458218454717153No Hit
CGCACAGGTCTGGTCG297440.11689871911325499No Hit
TGACTCCTCACTCCCA292170.11482752408324269No Hit
TAACAGCAGACTAGCG274240.10778074478758422No Hit
TGCGTAAGTCAACTGT262590.10320210681801247No Hit
AATGGCTAGTCCCGCA259970.10217240454502724No Hit
TTCGATTAGATTGACA259440.10196410599362182No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)