FastQCFastQC Report
Thu 12 Jan 2023
EGAF00007834203

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007834203
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49022609
Sequences flagged as poor quality0
Sequence length28
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGGGCAAATTTAAAGTTGAACTAAGAT710570.14494740579800638No Hit
TGTTCCGTTGGTCAAGTTATTGGATCAA605870.12358991338057915No Hit
CGTTGGGTTGACAGTGAGGGTAATAATG499100.10181016681507099No Hit
AGGGTGATAGATTGGTCCAATTGGGTGT494330.10083714638688447No Hit
CAGTCCTTTGAAGTATACTTGAGGAGGG493680.10070455450463683No Hit
TGACTTTTACTTCCTCTAGATAGTCAAG491160.1001905059765383No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)