FastQCFastQC Report
Thu 12 Jan 2023
EGAF00007834205

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007834205
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45281016
Sequences flagged as poor quality0
Sequence length28
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGGGCTGTTAATTGTCAGTTCAGTGTT731090.16145618287363517No Hit
GCACATACTGGGAATTCCTCGTTCATGG580640.12823033829452946No Hit
GGTGAAGTCTTAGCATGTACTGCTCGGA543990.12013643863468082No Hit
TGCTACCTTTGCACGGTTAGGGTACCGC533200.11775354157247707No Hit
GGCTGTTAATTGTCAGTTCAGTGTTTTA489860.10818220156544191No Hit
CCTCTATATAAATGCGTAGGGGTTTTAG466810.10309176808223561No Hit
GCACTTACTGGGAATTCCTCGTTCATGG460900.10178658535400355No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)