FastQCFastQC Report
Thu 12 Jan 2023
EGAF00007834219

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007834219
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20261362
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGGGATTCTCACATTCCAGGTCTCTTT369720.18247539331265095No Hit
GGACGTCTCCTCGCATGGACAACAGGTT291730.14398341039462204No Hit
GCTACAGTCCAAGTTCAGCCATCGATTT250320.12354549511528397No Hit
CACACAATCAGCTTAGCCAATAGCTTTT246160.12149232613286313No Hit
TGACTAGAGCGTGAACAATGTCCCTTTT244000.12042625762276002No Hit
ACATACGCAATCTGCAACCCAGCACGTT243700.12027819255191236No Hit
TAGTTGGTCGCCAGCACTTGTGGTTTTT235120.1160435315256694No Hit
GACACGCCACCAGTTACTGAGAGACTTT231900.1144542997652379No Hit
TGCGCTAGCTAGCCCACGTTGTCGTTTT230990.11400516905033334No Hit
CAGCTAAAGCACGCCTAGGAGCTTAATT226210.11164599892149402No Hit
GGCTGGTTCCTTGCCAAGTACCTCTGTT225410.11125115873256695No Hit
TGGTTCCTCGGAGGTATGATCACATCTT221750.10944476486822553No Hit
AGGTCCGAGGCTCATTTCAATAACCCTT214670.10595042919622087No Hit
TGCCAAACACCAGGTCCACCATGGGTTT213640.10544207245297725No Hit
GACAGAGAGCTAACTCGCACCCTGTGTT210390.10383803418546098No Hit
GCTGGGTATAATACTAAGTTGAGATGAT202920.10015121392135434No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)