FastQCFastQC Report
Thu 12 Jan 2023
EGAF00007834417

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007834417
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9328236
Sequences flagged as poor quality0
Sequence length28
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGGGCAAATTTAAAGTTGAACTAAGAT131480.14094840653688434No Hit
TGTTCCGTTGGTCAAGTTATTGGATCAA114270.12249904483548658No Hit
TGACTTTTACTTCCTCTAGATAGTCAAG97870.1049180145099245No Hit
CAGTCCTTTGAAGTATACTTGAGGAGGG94940.10177701336029663No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)