FastQCFastQC Report
Thu 12 Jan 2023
EGAF00007834435

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007834435
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9229268
Sequences flagged as poor quality0
Sequence length28
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGGGCAAATTTAAAGTTGAACTAAGAT131880.1428932392038025No Hit
TGTTCCGTTGGTCAAGTTATTGGATCAA114080.12360676924757195No Hit
TGACTTTTACTTCCTCTAGATAGTCAAG96070.10409276228623983No Hit
CAGTCCTTTGAAGTATACTTGAGGAGGG94780.10269503496918717No Hit
AGGGTGATAGATTGGTCCAATTGGGTGT93400.10119979179280524No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)