FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007834437

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007834437
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8915828
Sequences flagged as poor quality0
Sequence length28
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGGGCTGTTAATTGTCAGTTCAGTGTT140620.15771950737497403No Hit
GCACATACTGGGAATTCCTCGTTCATGG119720.1342780502270793No Hit
GGTGAAGTCTTAGCATGTACTGCTCGGA106110.11901306306043588No Hit
TGCTACCTTTGCACGGTTAGGGTACCGC102050.11445936372931374No Hit
GCACTTACTGGGAATTCCTCGTTCATGG93530.1049033247388801No Hit
GGCTGTTAATTGTCAGTTCAGTGTTTTA93330.10467900457478542No Hit
CCTCTATATAAATGCGTAGGGGTTTTAG91820.10298538733587055No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)