FastQCFastQC Report
Thu 5 Jan 2023
EGAF00007834463

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007834463
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences112449568
Sequences flagged as poor quality0
Sequence length16
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTTCTTGTTACGCCA15935011.41708058851769No Hit
TTTCTCATCATTTGGT14025871.2473031465981266No Hit
GTTACAAAGACTAATG12737261.1327086645633No Hit
CCTTTGTTCGAAGCAT11205210.9964653665899366No Hit
GGCTTAACAACCGCTC11009780.9790860201437145No Hit
TATTCAGGTTGGTTTA10226000.9093854411250385No Hit
TTCATTGCAAGGCCTG7569460.6731426482669991No Hit
TTGCAAGCAGCCGGTA5072980.45113379181679025No Hit
AATAGCTCATGGTGCG4491950.3994635177255639No Hit
GGCTAAGTCATCACAT3417370.3039024569663087No Hit
CTTACCGCACATGCCC3219490.28630523507213473No Hit
TTGATGAAGTAAGCGT2710850.2410725135022306No Hit
GCAAGAAAGGTTGCGA2528880.22489014808843016No Hit
GCGTTATGTATAGCTC1987380.17673522765334235No Hit
AGAGCCGGTTGTTGTA1888230.16791794166785948No Hit
CCCGATTAGTCAACAA1768200.1572438232933007No Hit
GGCTGATCATGGAGGA1645610.14634204730782072No Hit
GAGAGGAGTATATTCG1576620.14020685255100312No Hit
CAGCTAGAGCAAATCA1476410.13129530208599824No Hit
ATAGGCGTCGCTATGC1447440.12871903607490962No Hit
CCTGTGAGTGCTGTTG1429490.12712276493583327No Hit
AGAATCTCAATACCCT1382270.1229235491593885No Hit
ATAGCCACACTCGCTA1371580.121972900776284No Hit
TAGCTAGCAACAGGGA1296090.11525966911673684No Hit
CAACATAAGGCTTAAA1295760.11523032262782903No Hit
ACGGTTTGTTGAAGCA1282350.11403778803312076No Hit
GGTAATGGTAGGAGGA1234860.10981456149302415No Hit
ACCGAAGTCGATATAG1232950.1096447075723759No Hit
AAGTAGGAGGTTATAG1199310.10665314427886463No Hit
CAAGGTTAGTTACAAG1177510.10471449743586388No Hit
ACCTCATCATCCGGGA1136040.10102662199644911No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)