FastQCFastQC Report
Thu 12 Jan 2023
EGAF00007834469

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007834469
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences112358648
Sequences flagged as poor quality0
Sequence length16
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTTCTTGTTACGCCA15919671.416862011369165No Hit
TTTCTCATCATTTGGT14024011.2481469161145478No Hit
GTTACAAAGACTAATG12715831.131717960864036No Hit
CCTTTGTTCGAAGCAT11187130.9956625679582758No Hit
GGCTTAACAACCGCTC11024670.9812035118115696No Hit
TATTCAGGTTGGTTTA10179940.9060219378930227No Hit
TTCATTGCAAGGCCTG7582910.6748844112114983No Hit
TTGCAAGCAGCCGGTA5067330.45099599276061064No Hit
AATAGCTCATGGTGCG4478090.39855321149823736No Hit
GGCTAAGTCATCACAT3408250.30333668664293645No Hit
CTTACCGCACATGCCC3212450.28591034666063264No Hit
TTGATGAAGTAAGCGT2692040.23959348460654314No Hit
GCAAGAAAGGTTGCGA2529570.22513353845268766No Hit
GCGTTATGTATAGCTC1993300.1774051250598886No Hit
AGAGCCGGTTGTTGTA1878680.16720386311519164No Hit
CCCGATTAGTCAACAA1761210.1567489491329586No Hit
GGCTGATCATGGAGGA1633190.1453550776082674No Hit
GAGAGGAGTATATTCG1562390.13905382699158145No Hit
CAGCTAGAGCAAATCA1475090.13128406457863395No Hit
CCTGTGAGTGCTGTTG1428540.12714108129887786No Hit
ATAGGCGTCGCTATGC1426800.12698622005490845No Hit
AGAATCTCAATACCCT1376650.12252283420142258No Hit
ATAGCCACACTCGCTA1368820.12182595860356026No Hit
CAACATAAGGCTTAAA1292610.11504321411913038No Hit
TAGCTAGCAACAGGGA1284880.11435523859276057No Hit
ACGGTTTGTTGAAGCA1273140.11331037019954174No Hit
GGTAATGGTAGGAGGA1237430.11013215466957203No Hit
ACCGAAGTCGATATAG1229150.10939522874999351No Hit
AAGTAGGAGGTTATAG1189810.10589394062484625No Hit
CAAGGTTAGTTACAAG1157710.1030370176757556No Hit
ACCTCATCATCCGGGA1136720.10116889266948102No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)