FastQCFastQC Report
Thu 5 Jan 2023
EGAF00007834562

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007834562
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences85403368
Sequences flagged as poor quality0
Sequence length16
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TATCCATAGTTTCTGG8617251.0090058743350732No Hit
CGTGCCTCAAGTGGCT6423350.7521190499184996No Hit
GATTACTTCATTTGGT5959350.6977886399046932No Hit
TAATTGCTCTCGACTA2823030.33055253745964674No Hit
TAACCACGTACAATGG2414490.2827160165393009No Hit
TTCAAGCGTTACTTCT2324800.27221408879331316No Hit
ATGCAAATCTAGTTAC2282060.2672096023191966No Hit
TCACCGGTCCCTCGTC2187520.25613978127888354No Hit
TCGAAGCCAGCTACCC2168500.25391270283392103No Hit
GTTCCAGGTTAGGTTC2113790.24750663229112935No Hit
CGTATTGTCCACCCTC1911970.22387524576314133No Hit
TTGTCCTTCACAGCCT1872560.21926067365399454No Hit
CGTTAGCTCGCTCAAC1588170.18596105015436862No Hit
GCTCCTGAGGCAGGTC1550430.18154202068471118No Hit
GCTAAGCCATTTCATG1464270.17145342558387158No Hit
TCAGGGATCCCTGATA1431020.16756013650421842No Hit
TTTCCTGGTAGGTTTC1397230.16360361806808368No Hit
ACGTAAGGTTTGAGGA1391970.1629877172993927No Hit
TGTTGACGTACGTTTA1324940.1551390806976137No Hit
GAGGCTATCACATTAC1316800.15418595669435425No Hit
ACGGTTCTCTTGACCA1311710.15358996146381487No Hit
TAAGGATGTCTAACCG1298330.15202327851988226No Hit
TGTGCTGGTTCGCTTC1276760.1494976170026456No Hit
GCTCACCCAGCCAGTG1241060.14531745399080748No Hit
GAAACATGTAACCGCC1202190.14076611123814226No Hit
ACGGTCAAGCCAGGAC1196440.14009283568301428No Hit
TTCCTGAAGCCGATAG1166480.13658477731229524No Hit
GCAGCAATCAGCTAAA1090240.12765772890830254No Hit
CCGGTTAGTTACGAAG1052120.1231942047063062No Hit
TTGCCTTTCCTAATGT1011760.11846839576631217No Hit
TATCGCTCACTATACC1010360.11830446780506361No Hit
CCTGGACGTACGTTTA1006510.11785366591163009No Hit
CCTGGACGTCATGAAG983150.11511841078679708No Hit
AATGCCTGTAGCCTTG980450.11480226400438914No Hit
GAACCGGGTGTCCGTA936490.10965492602118457No Hit
GATAACGGTGCTTCGA925880.1084125862577223No Hit
ATTGTCAGTTAGCTAC856120.10024429013150862No Hit
GAGTAACTCTGTTGCA856090.10024077738948188No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)