FastQCFastQC Report
Thu 12 Jan 2023
EGAF00007834583

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007834583
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences85769236
Sequences flagged as poor quality0
Sequence length16
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TATCCATAGTTTCTGG8727461.0175513280775872No Hit
CGTGCCTCAAGTGGCT6524710.7607284737851693No Hit
GATTACTTCATTTGGT5971470.6962251593333535No Hit
TAATTGCTCTCGACTA2839060.33101145963338185No Hit
TAACCACGTACAATGG2435450.2839537943418314No Hit
TTCAAGCGTTACTTCT2378640.2773302073018349No Hit
ATGCAAATCTAGTTAC2290370.26703863842275566No Hit
TCACCGGTCCCTCGTC2210390.2577136165699319No Hit
TCGAAGCCAGCTACCC2175440.25363872892606854No Hit
GTTCCAGGTTAGGTTC2121790.24738357235687633No Hit
CGTATTGTCCACCCTC1923330.2242447396873163No Hit
TTGTCCTTCACAGCCT1903260.22190473983002482No Hit
CGTTAGCTCGCTCAAC1615070.1883041140765204No Hit
GCTCCTGAGGCAGGTC1590950.18549191693860956No Hit
GCTAAGCCATTTCATG1483970.17301891321499005No Hit
TCAGGGATCCCTGATA1440590.16796115567591158No Hit
TTTCCTGGTAGGTTTC1415260.16500788231342065No Hit
ACGTAAGGTTTGAGGA1400630.1633021425071339No Hit
TGTTGACGTACGTTTA1346390.15697819670446872No Hit
ACGGTTCTCTTGACCA1332480.15535640308140322No Hit
GAGGCTATCACATTAC1330260.15509756901647112No Hit
TAAGGATGTCTAACCG1314010.15320295029793665No Hit
TGTGCTGGTTCGCTTC1296130.15111828674794306No Hit
GCTCACCCAGCCAGTG1265030.14749227800047093No Hit
ACGGTCAAGCCAGGAC1212840.14140734563614393No Hit
GAAACATGTAACCGCC1210700.1411578389249031No Hit
TTCCTGAAGCCGATAG1185770.13825120233086838No Hit
GCAGCAATCAGCTAAA1105030.12883757061797776No Hit
CCGGTTAGTTACGAAG1062400.12386725701975473No Hit
TTGCCTTTCCTAATGT1022050.11916277300173223No Hit
TATCGCTCACTATACC1018260.11872088962060943No Hit
CCTGGACGTACGTTTA1017720.1186579299831935No Hit
CCTGGACGTCATGAAG992580.11572680908571925No Hit
AATGCCTGTAGCCTTG989840.11540734722179408No Hit
GAACCGGGTGTCCGTA936160.1091486928949676No Hit
GATAACGGTGCTTCGA932950.10877443282810634No Hit
ATGGCCTTCCAAGTGG862460.1005558683069067No Hit
ATTGTCAGTTAGCTAC859170.10017228088635417No Hit
TATACCTAGCGCTAGA857770.10000905219675735No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)