FastQCFastQC Report
Thu 5 Jan 2023
EGAF00007834596

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007834596
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences90841331
Sequences flagged as poor quality0
Sequence length50
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACTAGGCGGTATCTCGTATGCCGT1080290.11892053849365108No Hit
CTTATACACATCTCCGAGCCCACGAGACCTTCATACATCTCGTATGCCGT992540.1092608385493603No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)