FastQCFastQC Report
Thu 5 Jan 2023
EGAF00007834686

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007834686
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences81962755
Sequences flagged as poor quality0
Sequence length82
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGAGAAGTGCCCCCACCTGCTCCTCAGTTCCAGCCTGACCCCCTCCCAT1107220.13508818731141967No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG926660.11305866914795629No Hit
CACCCATCAGGGCCTGAGCTCGCCCGTCACAAAGAGCTTCAACAGGGGAG834010.10175475433933376No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)