FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007834694

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007834694
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences78343907
Sequences flagged as poor quality0
Sequence length82
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGAGAAGTGCCCCCACCTGCTCCTCAGTTCCAGCCTGACCCCCTCCCAT1061330.1354706499383545No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG895920.11435732966444984No Hit
CACCCATCAGGGCCTGAGCTCGCCCGTCACAAAGAGCTTCAACAGGGGAG784010.10007287484398754No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)