FastQCFastQC Report
Sun 21 May 2023
EGAF00007837456

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007837456
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53165
Sequences flagged as poor quality0
Sequence length250
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCGAATTACGTGTGTCAGCCGCCGCGGTAATACGGGGGGTGCGAGCGTTA13632.563716730932004No Hit
TAAGACATGCCGGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCT11172.1010063011379665No Hit
TAAGACATGCCGGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCT10672.0069594658139756No Hit
TCGAATTACGTGTGTCAGCAGCCGCGGTAATACGGGGGGTGCGAGCGTTA9831.8489607824696699No Hit
TCGAATTACGTGTGTCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTG9501.7868898711558354No Hit
TCGAATTACGTGTGTCAGCCGCCGCGGTAATACGGAAGGTCCAGGCGTTA9471.7812470610363962No Hit
TCGAATTACGTGTGCCAGCCGCCGCGGTAATACGGGGGGTGCGAGCGTTA8201.542368099313458No Hit
TCGAATTACGTGTGTCAGCCGCCGCGGTAATACGGAGGATGCGAGCGTTA7701.4483212639894667No Hit
TCGAATTACGTGTGTCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTA7371.3862503526756325No Hit
TCGAATTACGTGTGTCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTG7011.3185366312423588No Hit
TCGAATTACGTGTGTCAGCAGCCGCGGTAATACGGAAGGTCCAGGCGTTA6961.3091319477099594No Hit
TCGAATTACGTGTGTCAGCCGCCGCGGTAATACGGAGGGTGCGAGCGTTA6311.1868710617887708No Hit
TCGAATTACGTGTGTCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTG6201.1661807580174928No Hit
TAAGACATGCCGGACTACGGGGGTTTCTAATCCTGTTTGCTACCCACGCT6081.1436095175397347No Hit
TAAGACATGCCGGACTACTGGGGTTTCTAATCCTGTTTGCTACCCACGCT5761.0834195429323803No Hit
TAAGACATGCCGGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCT5761.0834195429323803No Hit
TAAGACATGCCGGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCT5681.0683720492805417No Hit
TCGAATTACGTGTGCCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTG5571.0476817455092637No Hit
TCGAATTACGTGTGTCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTA5481.0307533151509451No Hit
TCGAATTACGTGTGCCAGCAGCCGCGGTAATACGGGGGGTGCGAGCGTTA5431.021348631618546No Hit
TAAGACATGCCGGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCT5361.0081820746731873No Hit
TCGAATTACGTGTGCCAGCCGCCGCGGTAATACGGAAGGTCCAGGCGTTA5270.9912536443148687No Hit
TCGAATTACGTGTGTCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTG5100.9592777203047118No Hit
TCGAATTACGTGTGTCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTA4860.9141352393491959No Hit
TCGAATTACGTGTGTCAGCCGCCGCGGTAATACGGAAGGTCCGGGCGTTA4820.9066114925232766No Hit
TCGAATTACGTGTGTCAGCCGCCGCGGTAATACGTATGTCACAAGCGTTA4740.8915639988714379No Hit
TAAGACATGCCGGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCT4680.880278378632559No Hit
TCGAATTACGTGTGCCAGCCGCCGCGGTAATACGGAGGATGCGAGCGTTA4600.8652308849807204No Hit
TCGAATTACGTGTGCCAGCAGCCGCGGTAATACGGAAGGTCCAGGCGTTA4350.8182074673187246No Hit
TCGAATTACGTGTGCCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTA4220.7937552901344869No Hit
TAAGACATGCCGGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCT4160.782469669895608No Hit
TCGAATTACGTGTGTCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTA4030.7580174927113703No Hit
TAAGACATGCCGGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCT3910.7354462522336123No Hit
TCGAATTACGTGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTG3670.6903037712780965No Hit
TCGAATTACGTGTGTCAGCAGCCGCGGTAATACGGAAGGTCCGGGCGTTA3590.6752562776262578No Hit
TAAGACATGCCGGACTACCGGGGTTTCTAATCCTGTTTGCTACCCACGCT3590.6752562776262578No Hit
TAAGACATGCCGGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCT3580.673375340919778No Hit
TCGAATTACGTGTGCCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTG3460.6508041004420201No Hit
TAAGACATGCCGGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCT3310.6225900498448228No Hit
TAAGACATGCCGGACTACTGGGGTTTCTAATCCTGTTCGATACCCGCACC3240.609423492899464No Hit
TCGAATTACGTGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTA3230.6075425561929841No Hit
TAAGACATGCCGGACTACGCGGGTTTCTAATCCTGTTTGCTACCCACGCT3200.6018997460735446No Hit
TCGAATTACGTGTGCCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTA3200.6018997460735446No Hit
TCGAATTACGTGTGTCAGCAGCCGCGGTAATACGTATGTCACAAGCGTTA3110.5849713157152262No Hit
TCGAATTACGTGTGTCAGCCGCCGCGGTAATACGTAGGGGGCAAGCGTTA3090.5812094423022665No Hit
TAAGACATGCCGGACTACTCGGGTTTCTAATCCTGTTTGCTACCCACGCT3090.5812094423022665No Hit
TCGAATTACGTGTGCCAGCCGCCGCGGTAATACGGAGGGTGCGAGCGTTA3060.575566632182827No Hit
TAAGACATGCCGGACTACTGGGGTTTCTAATCCTGTTTGATACCCACGCT3000.5642810119439481No Hit
TAAGACATGCCGGACTACGGGGGTTTCTAATCCTGTTCGATACCCGCACC2940.5529953917050692No Hit
TCGAATTACGTGTGCCAGCCGCCGCGGTAATACGGAAGGTCCGGGCGTTA2700.5078529107495533No Hit
TAAGACATGCCGGACTACGGGGGTTTCTAATCCTGTTTGATACCCACGCT2670.5022101006301137No Hit
TCGAATTACGTGTGCCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTG2600.489043543684755No Hit
TAAGACATGCCGGACTACGAGGGTTTCTAATCCTGTTTGCTACCCACGCT2600.489043543684755No Hit
TAAGACATGCCGGACTACTGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT2590.4871626069782752No Hit
TCGAATTACGTGTGCCAGCCGCCGCGGTAATACGTATGTCACAAGCGTTA2520.4739960500329164No Hit
TAAGACATGCCGGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCT2490.46835323991347694No Hit
TAAGACATGCCGGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCT2430.45706761967459797No Hit
TCGAATTACGTGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTA2390.44954387284867864No Hit
TAAGACATGCCGGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCT2270.42697263237092076No Hit
TCGAATTACGTGTGTCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTA2260.4250916956644409No Hit
TAAGACATGCCGGACTACGGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT2220.41756794883852155No Hit
TAAGACATGCCGGACTACGGGGGTATCTAATCCTGTTTGCTACCCACGCT2170.40816326530612246No Hit
TAAGACATGCCGGACTACAGGGGTTTCTAATCCTGTTTGCTACCCACGCT2170.40816326530612246No Hit
TAAGACATGCCGGACTACCGGGGTTTCTAATCCTGTTCGATACCCGCACC2140.40252045518668295No Hit
TAAGACATGCCGGACTACGCGGGTTTCTAATCCTGTTCGATACCCGCACC1940.3649017210570864No Hit
TAAGACATGCCGGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCT1880.3536161008182075No Hit
TCGAATTACGTGTGCCAGCAGCCGCGGTAATACGGAAGGTCCGGGCGTTA1860.3498542274052478No Hit
TAAGACATGCCGGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCT1850.347973290698768No Hit
TAAGACATGCCGGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCT1850.347973290698768No Hit
TAAGACATGCCGGACTACTGGGGTATCTAATCCTGTTTGCTACCCACGCT1820.3423304805793285No Hit
TCGAATTACGTGTGTCAGCCGCCGCGGTAATACGGAGGATACGAGCGTTA1790.336687670459889No Hit
TAAGACATGCCGGACTACTAGGGTTTCTAATCCTGTTTGCTACCCACGCT1750.32916392363396973No Hit
TAAGACATGCCGGACTACTCGGGTTTCTAATCCTGTTCGATACCCGCACC1750.32916392363396973No Hit
TCGAATTACGTGTGCCAGCAGCCGCGGTAATACGTATGTCACAAGCGTTA1730.32540205022101004No Hit
TCGAATTACGTGTGTCAGCCGCCGCGGTAATACGTAGGGCGCGAGCGTTG1730.32540205022101004No Hit
TAAGACATGCCGGACTACCCGGGTTTCTAATCCTGTTTGCTACCCACGCT1640.3084736198626916No Hit
TAAGACATGCCGGACTACGAGGGTTTCTAATCCTGTTCGATACCCGCACC1620.304711746449732No Hit
TCGAATTACGTGTGCCAGCCGCCGCGGTAATACGTAGGGGGCAAGCGTTA1610.3028308097432521No Hit
TCGAATTACGTGTGTCAGCAGCCGCGGTAATACGGAGGATACGAGCGTTA1580.29718799962381265No Hit
TAAGACATGCCGGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCT1520.2859023793849337No Hit
TAAGACATGCCGGACTACGGGGGTTTCTAATCCTGTTTGATACCCGCACC1500.28214050597197404No Hit
TCGAATTACGTGTGTCAGCAGCCGCGGTAATACGTAGGGCGCGAGCGTTG1500.28214050597197404No Hit
TCGAATTACGTGTGTCAGCCGCCGCGGTAATACGTATGTCACGAGCGTTA1480.27837863255901435No Hit
TAAGACATGCCGGACTACCGGGGTTTCTAATCCTGTTTGATACCCACGCT1430.26897394902661526No Hit
TAAGACATGCCGGACTACGCGGGTTTCTAATCCTGTTTGATACCCACGCT1380.25956926549421616No Hit
TAAGACATGCCGGACTACTCGGGTTTCTAATCCCGTTCGCTCCCCTGGCT1370.2576883287877363No Hit
TAAGACATGCCGGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCT1370.2576883287877363No Hit
TCGAATTACGTGTGTCAGCAGCCGCGGTAATACGTATGTCACGAGCGTTA1330.250164581961817No Hit
TAAGACATGCCGGACTACCGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT1280.24075989842941786No Hit
TAAGACATGCCGGACTACTGGGGTTTCTAATCCTGTTTGATCCCCACGCT1280.24075989842941786No Hit
TAAGACATGCCGGACTACAGGGGTTTCTAATCCTGTTCGATACCCGCACC1260.2369980250164582No Hit
TCGAATTACGTGTGCCAGCCGCCGCGGTAATACGGAGGATACGAGCGTTA1260.2369980250164582No Hit
TAAGACATGCCGGACTACCAGGGTTTCTAATCCTGTTTGCTACCCACGCT1240.23323615160349853No Hit
TAAGACATGCCGGACTACGGGGGTTTCTAATCCTGTTTGATCCCCACGCT1220.22947427819053887No Hit
TAAGACATGCCGGACTACTCGGGTTTCTAATCCTGTTTGATACCCACGCT1210.22759334148405908No Hit
TCGAATTACGTGTGTCAGCCGCCGCGGTAATACGTATGTCGCAAGCGTTA1210.22759334148405908No Hit
TAAGACATGCCGGACTACGAGGGTTTCTAATCCTGTTTGATACCCACGCT1200.22571240477757926No Hit
TAAGACATGCCGGACTACGCGGGTATCTAATCCTGTTTGCTACCCACGCT1180.2219505313646196No Hit
TCGAATTACGTGTGCCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTA1180.2219505313646196No Hit
TAAGACATGCCGGACTACGAGGGTTTCTAATCCCGTTCGCTCCCCTGGCT1150.2163077212451801No Hit
TAAGACATGCCGGACTACTGGGGTTTCTAATCCTGTTTGATACCCGCACC1140.21442678453870026No Hit
TCGAATTACGTGTGTCAGCCGCCGCGGTAATACGGAAGGTTCGGGCGTTA1140.21442678453870026No Hit
TAAGACATGCCGGACTACACGGGTTTCTAATCCTGTTTGCTACCCACGCT1140.21442678453870026No Hit
TAAGACATGCCGGACTACGCGGGTTTCTAATCCCGTTCGCTCCCCTGGCT1110.20878397441926078No Hit
TAAGACATGCCGGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCT1080.20314116429982132No Hit
TAAGACATGCCGGACTACTGGGGTATCTAATCCTGTTCGATACCCGCACC1070.20126022759334147No Hit
TAAGACATGCCGGACTACTAGGGTTTCTAATCCTGTTCGATACCCGCACC1060.19937929088686165No Hit
TAAGACATGCCGGACTACGGGGGTATCTAATCCTGTTCGATACCCGCACC1040.195617417473902No Hit
TAAGACATGCCGGACTACTCGGGTTTCTAATCCTGTTTGATACCCGCACC1020.19185554406094235No Hit
TCGAATTACGTGTGCCAGCCGCCGCGGTAATACGTAGGGCGCGAGCGTTG980.18433179723502305No Hit
TAAGACATGCCGGACTACCGGGGTATCTAATCCTGTTTGCTACCCACGCT960.18056992382206338No Hit
TCGAATTACGTGTGCCAGCAGCCGCGGTAATACGGAGGATACGAGCGTTA960.18056992382206338No Hit
TAAGACATGCCGGACTACTGGGGTATCTAATCCCGTTCGCTCCCCTGGCT960.18056992382206338No Hit
TCGAATTACGTGTGTCAGCCGCCGCGGTAAGTTTTAATTTTTGTAGAGAA930.1749271137026239No Hit
TAAGACATGCCGGACTACCGGGGTTTCTAATCCTGTTTGATACCCGCACC920.17304617699614408No Hit
TAAGACATGCCGGACTACGGGGGTATCTAATCCCGTTCGCTCCCCTGGCT920.17304617699614408No Hit
TAAGACATGCCGGACTACTAGGGTTTCTAATCCTGTTTGATACCCACGCT920.17304617699614408No Hit
TCGAATTACGTGTGCCAGCCGCCGCGGTAATACGTATGTCACGAGCGTTA910.17116524028966426No Hit
TCGAATTACGTGTGTCAGCCGCCGCGGTAATACGTATGTCGCGAGCGTTA910.17116524028966426No Hit
TAAGACATGCCGGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCT910.17116524028966426No Hit
TCGAATTACGTGTGTCAGCAGCCGCGGTAATACGTATGTCGCGAGCGTTA910.17116524028966426No Hit
TAAGACATGCCGGACTACTCGGGTATCTAATCCTGTTTGCTACCCACGCT910.17116524028966426No Hit
TAAGACATGCCGGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCT900.16928430358318444No Hit
TAAGACATGCCGGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCTAGCT900.16928430358318444No Hit
TAAGACATGCCGGACTACGAGGGTATCTAATCCTGTTTGCTACCCACGCT890.1674033668767046No Hit
TCGAATTACGTGTGTCAGCAGCCGCGGTAATACGGAAGGTTCGGGCGTTA880.16552243017022478No Hit
TAAGACATGCCGGACTACCCGGGTTTCTAATCCTGTTCGATACCCGCACC870.16364149346374493No Hit
TAAGACATGCCGGACTACTGGGGTTTCTAATCCTGTTCGCTCCCCACGCT870.16364149346374493No Hit
TCGAATTACGTGTGTCAGCAGCCGCGGTAATACGTATGTCGCAAGCGTTA850.1598796200507853No Hit
TAAGACATGCCGGACTACTGGGGTATCTAATCCTGTTTGATACCCACGCT850.1598796200507853No Hit
TAAGACATGCCGGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCT840.15799868334430547No Hit
TAAGACATGCCGGACTACGGGGGTTTCTAATCCTGTTCGCTCCCCACGCT830.15611774663782563No Hit
TAAGACATGCCGGACTACTGGGGTTTCTAATCCTGTTCGATACCCGCACT830.15611774663782563No Hit
TCGAATTACGTGTGTCAGCCGCCGCGGTAATACGTAGGTCTCAAGCGTTA830.15611774663782563No Hit
TAAGACATGCCGGACTACGGGGGTATCTAATCCTGTTTGATACCCACGCT820.1542368099313458No Hit
TCGAATTACGTGTGCCAGCAGCCGCGGTAATACGTATGTCACGAGCGTTA810.152355873224866No Hit
TCGAATTACGTGTGTCAGCCGCCGCGGTAATACGGAGGGTGCAAGCGTTA760.14295118969246684No Hit
TCGAATTACGTGTGTCAGCCGCCGCGGTAATACGTAGGTGGCGAGCGTTA760.14295118969246684No Hit
TAAGACATGCCGGACTACTAGGGTTTCTAATCCCGTTCGCTCCCCTGGCT740.13918931627950717No Hit
TAAGACATGCCGGACTACAAGGGTTTCTAATCCTGTTTGCTACCCACGCT740.13918931627950717No Hit
TAAGACATGCCGGACTACAGGGGTTTCTAATCCTGTTTGATACCCACGCT740.13918931627950717No Hit
TCGAATTACGTGTGTCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTA720.13542744286654754No Hit
TAAGACATGCCGGACTACGAGGGTTTCTAATCCTGTTTGATCCCCACGCT700.13166556945358787No Hit
TCGAATTACGTGTGCCAGCAGCCGCGGTAATACGTAGGGCGCGAGCGTTG690.12978463274710808No Hit
TAAGACATGCCGGACTACTGGGGTTTCTAATCCTGTTTGATACCCACACT690.12978463274710808No Hit
TAAGACATGCCGGACTACGCGGGTTTCTAATCCTGTTTGATACCCGCACC680.12790369604062823No Hit
TAAGACATGCCGGACTACAGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT670.12602275933414842No Hit
TAAGACATGCCGGACTACGCGGGTATCTAATCCCGTTCGCTCCCCTGGCT670.12602275933414842No Hit
TCGAATTACGTGTGTCAGCCGCCGCGGTAATACGTAGGGGGCTAGCGTTA660.12414182262766857No Hit
TAAGACATGCCGGACTACGAGGGTTTCTAATCCTGTTTGATACCCGCACC660.12414182262766857No Hit
TAAGACATGCCGGACTACGCGGGTATCTAATCCTGTTCGATACCCGCACC640.12037994921470893No Hit
TAAGACATGCCGGACTACGGGGGTATCTAATCCTGTTTGATACCCGCACC640.12037994921470893No Hit
TAAGACATGCCGGACTACCGGGGTATCTAATCCTGTTCGATACCCGCACC630.1184990125082291No Hit
TAAGACATGCCGGACTACAGGGGTATCTAATCCTGTTTGCTACCCACGCT630.1184990125082291No Hit
TAAGACATGCCGGACTACGCGGGTTTCTAATCCTGTTTGATCCCCACGCT630.1184990125082291No Hit
TAAGACATGCCGGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCTAGCT630.1184990125082291No Hit
TAAGACATGCCGGACTACCGGGGTTTCTAATCCTGTTTGATCCCCACGCT620.11661807580174927No Hit
TCGAATTACGTGTGCCAGCCGCCGCGGTAATACGTATGTCGCAAGCGTTA620.11661807580174927No Hit
TAAGACATGCCGGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCT620.11661807580174927No Hit
TCGAATTACGTGTGCCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTA600.11285620238878963No Hit
TCGAATTACGTGTGTCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTA590.1109752656823098No Hit
TCGAATTACGTGTGTCAGCAGCCGCGGTAATACGTAGGTGGCGAGCGTTA580.10909432897582996No Hit
TAAGACATGCCGGACTACGGGGGTTTCTAATCCTGTTTGATACCCACACT580.10909432897582996No Hit
TAAGACATGCCGGACTACACGGGTTTCTAATCCTGTTCGATACCCGCACC580.10909432897582996No Hit
TAAGACATGCCGGACTACTAGGGTATCTAATCCTGTTTGCTACCCACGCT580.10909432897582996No Hit
TAAGACATGCCGGACTACTCGGGTATCTAATCCTGTTCGATACCCGCACC580.10909432897582996No Hit
TCGAATTACGTGTGTCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTA550.10345151885639049No Hit
TAAGACATGCCGGACTACAAGGGTTTCTAATCCTGTTCGATACCCGCACC550.10345151885639049No Hit
TAAGACATGCCGGACTACGGGGGTTTCTAATCCTGTTCGATACCCGCACT550.10345151885639049No Hit
TAAGACATGCCGGACTACCAGGGTTTCTAATCCTGTTCGATACCCGCACC550.10345151885639049No Hit
TAAGACATGCCGGACTACTCGGGTTTCTAATCCTGTTTGATCCCCACGCT540.10157058214991066No Hit
TAAGACATGCCGGACTACGAGGGTATCTAATCCTGTTCGATACCCGCACC540.10157058214991066No Hit

[OK]Adapter Content

Adapter graph