FastQCFastQC Report
Sun 21 May 2023
EGAF00007837632

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007837632
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences46286
Sequences flagged as poor quality0
Sequence length250
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTCGCCTCCCGGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCT16053.4675711878321738No Hit
ACATTGATGGTGTGTCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTG12262.648749081795791No Hit
ACATTGATGGTGTGTCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTG12172.629304757378041No Hit
ACATTGATGGTGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTG11462.4759106425268977No Hit
ACATTGATGGTGTGCCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTG10912.3570842155295337No Hit
ACATTGATGGTGTGTCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTA9552.0632588687724147No Hit
ACATTGATGGTGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTA9292.0070863760100246No Hit
ATTCGCCTCCCGGACTACTGGGGTTTCTAATCCTGTTTGCTACCCACGCT8501.8364084172319926No Hit
ATTCGCCTCCCGGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCT8011.7305448731797952No Hit
ATTCGCCTCCCGGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCT7991.726223912198073No Hit
ACATTGATGGTGTGTCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTG6741.4561638508404269No Hit
ACATTGATGGTGTGTCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTG6061.3092511774618676No Hit
ACATTGATGGTGTGTCAGCAGCCGCGGTAATACGGAAGGTCCAGGCGTTA5661.2228319578274207No Hit
ACATTGATGGTGTGCCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTG5651.2206714773365597No Hit
ATTCGCCTCCCGGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCT5531.1947457114462257No Hit
ATTCGCCTCCCGGACTACTCGGGTTTCTAATCCTGTTTGCTACCCACGCT5121.1061660113209177No Hit
ATTCGCCTCCCGGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCT5041.0888821673940283No Hit
ATTCGCCTCCCGGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCT5011.0824007259214448No Hit
ACATTGATGGTGTGCCAGCAGCCGCGGTAATACGGAAGGTCCAGGCGTTA4971.0737588039580002No Hit
ACATTGATGGTGTGCCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTG4911.0607959210128333No Hit
ACATTGATGGTGTGTCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTA4891.056474960031111No Hit
ATTCGCCTCCCGGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCT4791.0348701551224992No Hit
ACATTGATGGTGTGCCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTA4290.9268461305794409No Hit
ATTCGCCTCCCGGACTACTGGGGTATCTAATCCTGTTTGCTACCCACGCT4120.890117962234801No Hit
ACATTGATGGTGTGTCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTA4000.864192196344467No Hit
ACATTGATGGTGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTA3980.8598712353627447No Hit
ACATTGATGGTGTGTCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTA3870.8361059499632718No Hit
ACATTGATGGTGTGCCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTA3840.8296245084906883No Hit
ATTCGCCTCCCGGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCT3330.7194400034567688No Hit
ACATTGATGGTGTGTCAGCCGCCGCGGTAATACGGAAGGTCCAGGCGTTA3160.682711835112129No Hit
ACATTGATGGTGTGTCAGCAGCCGCGGTAATACGGAGGATACGAGCGTTA3150.6805513546212677No Hit
ATTCGCCTCCCGGACTACCGGGGTTTCTAATCCTGTTTGCTACCCACGCT3050.6589465497126561No Hit
ACATTGATGGTGTGTCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTA3020.6524651082400726No Hit
ATTCGCCTCCCGGACTACGGGGGTTTCTAATCCTGTTTGCTACCCACGCT2840.6135764594045715No Hit
ATTCGCCTCCCGGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCT2820.6092554984228492No Hit
ATTCGCCTCCCGGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCT2800.6049345374411269No Hit
ACATTGATGGTGTGCCAGCAGCCGCGGTAATACGGAGGATACGAGCGTTA2770.5984530959685433No Hit
ATTCGCCTCCCGGACTACTAGGGTTTCTAATCCTGTTTGCTACCCACGCT2730.5898111740050987No Hit
ACATTGATGGTGTGCCAGCCGCCGCGGTAATACGGAAGGTCCAGGCGTTA2720.5876506935142376No Hit
ATTCGCCTCCCGGACTACTCGGGTATCTAATCCTGTTTGCTACCCACGCT2630.568206369096487No Hit
ACATTGATGGTGTGCCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTA2590.5595644471330424No Hit
ATTCGCCTCCCGGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCT2450.5293177202609861No Hit
ATTCGCCTCCCGGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCT2370.5120338763340967No Hit
ATTCGCCTCCCGGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCT2330.503391954370652No Hit
ACATTGATGGTGTGTCAGCCGCCGCGGTAATACGGAGGGTGCGAGCGTTA2290.49475003240720733No Hit
ACATTGATGGTGTGTCAGCAGCCGCGGTAATACGTATGTCACAAGCGTTA2280.4925895519163462No Hit
ACATTGATGGTGTGTCAGCAGCCGCGGTAATACGGAAGGTCCGGGCGTTA2240.4839476299529015No Hit
ACATTGATGGTGTGCCAGCAGCCGCGGTAATACGTAGGGCGCGAGCGTTG2240.4839476299529015No Hit
ACATTGATGGTGTGCCAGCAGCCGCGGTAATACGGAAGGTCCGGGCGTTA2220.47962666897117917No Hit
ATTCGCCTCCCGGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCT2160.4666637860260122No Hit
ACATTGATGGTGTGTCAGCAGCCGCGGTAATACGTAGGGCGCGAGCGTTG2140.46234282504428986No Hit
ACATTGATGGTGTGCCAGCCGCCGCGGTAATACGGAGGATGCGAGCGTTA2020.43641705915395584No Hit
ATTCGCCTCCCGGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCT1980.42777513719051113No Hit
ATTCGCCTCCCGGACTACTGGGGTTTCTAATCCTGTTCGATACCCGCACC1970.42561465669965No Hit
ATTCGCCTCCCGGACTACAGGGGTTTCTAATCCTGTTTGCTACCCACGCT1940.4191332152270665No Hit
ACATTGATGGTGTGTCAGCCGCCGCGGTAATACGGAGGATGCGAGCGTTA1900.41049129326362177No Hit
ATTCGCCTCCCGGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCT1900.41049129326362177No Hit
ATTCGCCTCCCGGACTACTGGGGTTTCTAATCCTGTTTGATCCCCACGCT1780.3845655273732878No Hit
ACATTGATGGTGTGCCAGCCGCCGCGGTAATACGGAGGGTGCGAGCGTTA1780.3845655273732878No Hit
ATTCGCCTCCCGGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCT1730.373763124918982No Hit
ACATTGATGGTGTGTCAGCCGCCGCGGTAATACGGAGGATACGAGCGTTA1680.36296072246467614No Hit
ATTCGCCTCCCGGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCT1660.35863976148295384No Hit
ACATTGATGGTGTGTCAGCCGCCGCGGTAATACGTAGGGGGCAAGCGTTA1650.35647928099209264No Hit
ACATTGATGGTGTGCCAGCAGCCGCGGTAATACGGGGGGTGCGAGCGTTA1630.35215832001037034No Hit
ACATTGATGGTGTGTCAGCAGCCGCGGTAATACGGGGGGTGCGAGCGTTA1600.3456768785377868No Hit
ATTCGCCTCCCGGACTACGCGGGTTTCTAATCCTGTTTGCTACCCACGCT1560.3370349565743421No Hit
ATTCGCCTCCCGGACTACCCGGGTTTCTAATCCTGTTTGCTACCCACGCT1560.3370349565743421No Hit
ATTCGCCTCCCGGACTACTAGGGTATCTAATCCTGTTTGCTACCCACGCT1550.334874476083481No Hit
ACATTGATGGTGTGCCAGCAGCCGCGGTAATACGTATGTCACAAGCGTTA1520.32839303461089747No Hit
ACATTGATGGTGTGTCAGCCGCCGCGGTAATACGGAAGGTCCGGGCGTTA1480.3197511126474528No Hit
ACATTGATGGTGTGTCAGCCGCCGCGGTAATACGTAGGGCGCGAGCGTTG1410.3046277492114246No Hit
ATTCGCCTCCCGGACTACTGGGGTTTCTAATCCTGTTCGCTCCCCACGCT1390.30030678822970225No Hit
ATTCGCCTCCCGGACTACACGGGTTTCTAATCCTGTTTGCTACCCACGCT1380.29814630773884115No Hit
ACATTGATGGTGTGCCAGCCGCCGCGGTAATACGTAGGGGGCAAGCGTTA1360.2938253467571188No Hit
ATTCGCCTCCCGGACTACGGGGGTATCTAATCCTGTTTGCTACCCACGCT1360.2938253467571188No Hit
ATTCGCCTCCCGGACTACCGGGGTATCTAATCCTGTTTGCTACCCACGCT1340.28950438577539644No Hit
ATTCGCCTCCCGGACTACTGGGGTTTCTAATCCTGTTCGCTCCCCATGCT1300.2808624638119518No Hit
ACATTGATGGTGTGCCAGCCGCCGCGGTAATACGGAGGATACGAGCGTTA1290.2787019833210906No Hit
ATTCGCCTCCCGGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCT1290.2787019833210906No Hit
ACATTGATGGTGTGCCAGCCGCCGCGGTAATACGTAGGGCGCGAGCGTTG1260.2722205418485071No Hit
ATTCGCCTCCCGGACTACTGGGGTTTCTAATCCTGTTTGATACCCACGCT1240.2678995808667847No Hit
ATTCGCCTCCCGGACTACTCGGGTTTCTAATCCTGTTCGATACCCGCACC1220.2635786198850625No Hit
ATTCGCCTCCCGGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCT1210.2614181393942013No Hit
ATTCGCCTCCCGGACTACTCGGGTTTCTAATCCTGTTTGATCCCCACGCT1210.2614181393942013No Hit
ATTCGCCTCCCGGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCT1160.2506157369398954No Hit
ATTCGCCTCCCGGACTACCAGGGTTTCTAATCCTGTTTGCTACCCACGCT1120.24197381497645076No Hit
ATTCGCCTCCCGGACTACGAGGGTTTCTAATCCTGTTTGCTACCCACGCT1090.23549237350386729No Hit
ATTCGCCTCCCGGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCT1090.23549237350386729No Hit
ACATTGATGGTGTGCCAGCCGCCGCGGTAATACGTATGTCACAAGCGTTA1080.2333318930130061No Hit
ACATTGATGGTGTGTCAGCAGCCGCGGTAATACGGAGGGGGCAAGCGTTA1070.23117141252214493No Hit
ACATTGATGGTGTGTCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTA1060.22901093203128378No Hit
ATTCGCCTCCCGGACTACTGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT1060.22901093203128378No Hit
ACATTGATGGTGTGTCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTA1050.2268504515404226No Hit
ACATTGATGGTGTGCCAGCCGCCGCGGTAATACGGAAGGTCCGGGCGTTA1010.21820852957697792No Hit
ATTCGCCTCCCGGACTACAGGGGTATCTAATCCTGTTTGCTACCCACGCT1010.21820852957697792No Hit
ACATTGATGGTGTGCCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTA990.21388756859525557No Hit
ACATTGATGGTGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTA990.21388756859525557No Hit
ACATTGATGGTGTGTCAGCCGCCGCGGTAATACGTATGTCACAAGCGTTA990.21388756859525557No Hit
ATTCGCCTCCCGGACTACTGGGGTATCTAATCCTGTTCGATACCCGCACC980.21172708810439442No Hit
ATTCGCCTCCCGGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCT970.20956660761353324No Hit
ATTCGCCTCCCGGACTACTGGGGTATCTAATCCTGTTTGATCCCCACGCT920.19876420515922744No Hit
ACATTGATGGTGTGCCAGCAGCCGCGGTAATACGTATGTCGCAAGCGTTA920.19876420515922744No Hit
ATTCGCCTCCCGGACTACGGGGGTTTCTAATCCTGTTCGATACCCGCACC900.19444324417750508No Hit
ATTCGCCTCCCGGACTACTGGGGTATCTAATCCTGTTCGCTCCCCACGCT890.1922827636866439No Hit
ATTCGCCTCCCGGACTACTCGGGTTTCTAATCCTGTTCGCTCCCCACGCT870.18796180270492158No Hit
ACATTGATGGTGTGTCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTA860.1858013222140604No Hit
ATTCGCCTCCCGGACTACCCGGGTATCTAATCCTGTTTGCTACCCACGCT840.18148036123233807No Hit
ATTCGCCTCCCGGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCT840.18148036123233807No Hit
ATTCGCCTCCCGGACTACAAGGGTTTCTAATCCTGTTTGCTACCCACGCT840.18148036123233807No Hit
ATTCGCCTCCCGGACTACTAGGGTTTCTAATCCTGTTCGATACCCGCACC830.17931988074147692No Hit
ACATTGATGGTGTGTCAGCAGCCGCGGTAATACGTATGTCACGAGCGTTA830.17931988074147692No Hit
ACATTGATGGTGTGTCAGCAGCCGCGGTAATACGTATGTCGCAAGCGTTA820.17715940025061575No Hit
ATTCGCCTCCCGGACTACTGGGGTTTCTAATCCTGTTTGATACCCGCACC810.17499891975975457No Hit
ACATTGATGGTGTGCCAGCAGCCGCGGTAATACGGAGGGGGCAAGCGTTA780.16851747828717106No Hit
ATTCGCCTCCCGGACTACTCGGGTTTCTAATCCTGTTCGCTCCCCATGCT780.16851747828717106No Hit
ATTCGCCTCCCGGACTACTGGGGTTTCTAATCCTGTTCGATACCCGCACT760.16419651730544874No Hit
ATTCGCCTCCCGGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCTAGCT760.16419651730544874No Hit
ACATTGATGGTGTGTCAGCCGCCGCGGTAATACGGGGGGTGCGAGCGTTA760.16419651730544874No Hit
ATTCGCCTCCCGGACTACCGGGGTTTCTAATCCTGTTCGATACCCGCACC750.16203603681458756No Hit
ATTCGCCTCCCGGACTACTGGGGTTTCTAATCCTGTTTGATACCCACACT740.1598755563237264No Hit
ATTCGCCTCCCGGACTACGGGGGTTTCTAATCCTGTTTGATCCCCACGCT740.1598755563237264No Hit
ACATTGATGGTGTGCCAGCCGCCGCGGTAATACGGGGGGTGCGAGCGTTA720.15555459534200405No Hit
ATTCGCCTCCCGGACTACTAGGGTTTCTAATCCTGTTTGATCCCCACGCT720.15555459534200405No Hit
ATTCGCCTCCCGGACTACTCGGGTTTCTAATCCTGTTTGATACCCACGCT720.15555459534200405No Hit
ACATTGATGGTGTGCCAGCAGCCGCGGTAATACGTAGGTGGCGAGCGTTG710.15339411485114288No Hit
ACATTGATGGTGTGCCAGCAGCCGCGGTAATACGTATGTCGCGAGCGTTA710.15339411485114288No Hit
ATTCGCCTCCCGGACTACGCGGGTATCTAATCCTGTTTGCTACCCACGCT700.15123363436028173No Hit
ACATTGATGGTGTGCCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTA680.1469126733785594No Hit
ATTCGCCTCCCGGACTACCGGGGTTTCTAATCCTGTTTGATCCCCACGCT680.1469126733785594No Hit
ATTCGCCTCCCGGACTACTCGGGTATCTAATCCTGTTTGATCCCCACGCT670.14475219288769822No Hit
ACATTGATGGTGTGTCAGCAGCCGCGGTAATACGTATGTCGCGAGCGTTA650.1404312319059759No Hit
ATTCGCCTCCCGGACTACTGGGGTATCTAATCCTGTTCGCTCCCCATGCT640.13827075141511472No Hit
ACATTGATGGTGTGCCAGCAGCCGCGGTAATACGTATGTCACGAGCGTTA640.13827075141511472No Hit
ATTCGCCTCCCGGACTACCGGGGTTTCTAATCCTGTTCGCTCCCCACGCT640.13827075141511472No Hit
ATTCGCCTCCCGGACTACGAGGGTATCTAATCCTGTTTGCTACCCACGCT630.13611027092425354No Hit
ACATTGATGGTGTGTCAGCCGCCGCGGTAATACGGAGGGTGCAAGCGTTA630.13611027092425354No Hit
ACATTGATGGTGTGTCAGCAGCCGCGGTAATACGGAAGGTTCGGGCGTTA630.13611027092425354No Hit
ACATTGATGGTGTGTCAGCCGCCGCGGTAATACGTATGTCGCAAGCGTTA620.13394979043339236No Hit
ATTCGCCTCCCGGACTACTGGGGTATCTAATCCTGTTTGATACCCACGCT610.13178930994253124No Hit
ATTCGCCTCCCGGACTACTGGGGTTTCTAATCCTGTTTGATACCCACGCC610.13178930994253124No Hit
ACATTGATGGTGTGTCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTA610.13178930994253124No Hit
ATTCGCCTCCCGGACTACACGGGTATCTAATCCTGTTTGCTACCCACGCT590.12746834896080889No Hit
ATTCGCCTCCCGGACTACGGGGGTTTCTAATCCTGTTCGCTCCCCACGCT590.12746834896080889No Hit
ACATTGATGGTGTGCCAGCAGCCGCGGTAATACGGAAGGTTCGGGCGTTA580.1253078684699477No Hit
ACATTGATGGTGTGTCAGCAGCCGCGGTAATACGTAGGTGGCGAGCGTTG580.1253078684699477No Hit
ATTCGCCTCCCGGACTACTCGGGTATCTAATCCTGTTCGATACCCGCACC570.12314738797908654No Hit
ATTCGCCTCCCGGACTACTAGGGTTTCTAATCCTGTTCGCTCCCCACGCT570.12314738797908654No Hit
ATTCGCCTCCCGGACTACTCGGGTTTCTAATCCCGTTCGCTCCCCTGGCT560.12098690748822538No Hit
ACATTGATGGTGTGTCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA560.12098690748822538No Hit
ACATTGATGGTGTGCCAGCAGCCGCGGTAACACGTAAGGGGCGAGCGTTG550.1188264269973642No Hit
ATTCGCCTCCCGGACTACCGGGGTTTCTAATCCTGTTCGCTCCCCATGCT550.1188264269973642No Hit
ATTCGCCTCCCGGACTACCGGGGTTTCTAATCCTGTTTGATACCCACGCT540.11666594650650305No Hit
ATTCGCCTCCCGGACTACCAGGGTATCTAATCCTGTTTGCTACCCACGCT520.11234498552478071No Hit
ACATTGATGGTGTGTCAGCAGCCGCGGTAACACGTAAGGGGCGAGCGTTG520.11234498552478071No Hit
ATTCGCCTCCCGGACTACAGGGGTTTCTAATCCTGTTTGATCCCCACGCT520.11234498552478071No Hit
ATTCGCCTCCCGGACTACTGGGGTATCTAATCCCGTTCGCTCCCCTGGCT520.11234498552478071No Hit
ATTCGCCTCCCGGACTACTCGGGTTTCTAATCCTGTTTGATACCCACACT510.11018450503391955No Hit
ATTCGCCTCCCGGACTACTAGGGTTTCTAATCCTGTTTGATACCCACGCT510.11018450503391955No Hit
ACATTGATGGTGTGCCAGCCGCCGCGGTAATACGTATGTCGCAAGCGTTA510.11018450503391955No Hit
ATTCGCCTCCCGGACTACAAGGGTATCTAATCCTGTTTGCTACCCACGCT500.10802402454305837No Hit
ACATTGATGGTGTGTCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTA500.10802402454305837No Hit
ACATTGATGGTGTGCCAGCAGCCGCGGTAATACGTAGGTGGCGAGCGTTA500.10802402454305837No Hit
ACATTGATGGTGTGTCAGCCGCCGCGGTAATACAGAGGGTGCAAGCGTTA490.10586354405219721No Hit
ATTCGCCTCCCGGACTACGGGGGTTTCTAATCCTGTTTGATACCCACGCT490.10586354405219721No Hit
ACATTGATGGTGTGCCAGCCGCCGCGGTAATACGGAGGGTGCAAGCGTTA480.10370306356133603No Hit
ACATTGATGGTGTGTCAGCCGCCGCGGTAATACGGAGGGGGCAAGCGTTA470.10154258307047488No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)