FastQCFastQC Report
Sun 21 May 2023
EGAF00007837802

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007837802
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36564
Sequences flagged as poor quality0
Sequence length250
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGTTGGACGTGTGTCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTA18735.122524887867848No Hit
ATGTTGGACGTGTGTCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTA17424.764248988075702No Hit
ATACCGGTTCCGGACTACTGGGGTTTCTAATCCTGTTTGCTACCCACGCT11783.2217481675965427No Hit
ATGTTGGACGTGTGCCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTA10402.8443277540750467No Hit
ATGTTGGACGTGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTA10042.7458702548955256No Hit
ATACCGGTTCCGGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCT6651.818728804288371No Hit
ATACCGGTTCCGGACTACTGGGGTATCTAATCCTGTTTGCTACCCACGCT6311.7257411661743791No Hit
ATGTTGGACGTGTGTCAGCCGCCGCGGTAATACGTAGGGCGCGAGCGTTG6301.7230062356416147No Hit
ATACCGGTTCCGGACTACTCGGGTTTCTAATCCTGTTTGCTACCCACGCT5671.5507056120774532No Hit
ATGTTGGACGTGTGTCAGCAGCCGCGGTAATACGTAGGGCGCGAGCGTTG5601.5315610983481018No Hit
ATGTTGGACGTGTGTCAGCCGCCGCGGTAATACGGAGGGTGCGAGCGTTA5551.5178864456842796No Hit
ATACCGGTTCCGGACTACCGGGGTTTCTAATCCTGTTTGCTACCCACGCT5361.4659227655617546No Hit
ATGTTGGACGTGTGTCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTA4701.2854173503992998No Hit
ATACCGGTTCCGGACTACTAGGGTTTCTAATCCTGTTTGCTACCCACGCT4121.1267913794989608No Hit
ATGTTGGACGTGTGCCAGCAGCCGCGGTAATACGTAGGGCGCGAGCGTTG3991.0912372825730228No Hit
ATACCGGTTCCGGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCT3650.9982496444590307No Hit
ATGTTGGACGTGTGTCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTG3560.9736352696641505No Hit
ATGTTGGACGTGTGTCAGCCGCCGCGGTAATACGGAAGGTCCAGGCGTTA3420.9353462422054479No Hit
ATGTTGGACGTGTGCCAGCCGCCGCGGTAATACGGAGGGTGCGAGCGTTA3320.9079969368778033No Hit
ATGTTGGACGTGTGTCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTG3230.8833825620829232No Hit
ATGTTGGACGTGTGTCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTG3230.8833825620829232No Hit
ATGTTGGACGTGTGCCAGCCGCCGCGGTAATACGTAGGGCGCGAGCGTTG3230.8833825620829232No Hit
ATGTTGGACGTGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTA3190.8724428399518652No Hit
ATGTTGGACGTGTGTCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTG3170.8669729788863363No Hit
ATGTTGGACGTGTGTCAGCAGCCGCGGTAATACGGAAGGTCCAGGCGTTA3170.8669729788863363No Hit
ATACCGGTTCCGGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCT3040.8314188819603983No Hit
ATACCGGTTCCGGACTACTGGGGTTTCTAATCCTGTTCGCTCCCCATGCT3010.8232140903621048No Hit
ATACCGGTTCCGGACTACGGGGGTTTCTAATCCTGTTTGCTACCCACGCT2920.7985997155672245No Hit
ATGTTGGACGTGTGTCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTA2850.7794552018378733No Hit
ATACCGGTTCCGGACTACTCGGGTATCTAATCCTGTTTGCTACCCACGCT2830.7739853407723444No Hit
ATACCGGTTCCGGACTACAGGGGTTTCTAATCCTGTTTGCTACCCACGCT2770.7575757575757576No Hit
ATGTTGGACGTGTGTCAGCCGCCGCGGTAATACGGAGGATGCGAGCGTTA2690.7356963133136418No Hit
ATACCGGTTCCGGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCT2670.7302264522481129No Hit
ATACCGGTTCCGGACTACCGGGGTATCTAATCCTGTTTGCTACCCACGCT2570.7028771469204682No Hit
ATGTTGGACGTGTGCCAGCCGCCGCGGTAATACGGAAGGTCCAGGCGTTA2350.6427086751996499No Hit
ATGTTGGACGTGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTG2220.6071545782737119No Hit
ATGTTGGACGTGTGCCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTG2130.5825402034788316No Hit
ATGTTGGACGTGTGCCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTA2100.5743354118805383No Hit
ATGTTGGACGTGTGCCAGCAGCCGCGGTAATACGGAAGGTCCAGGCGTTA2050.5606607592167159No Hit
ATACCGGTTCCGGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCT2020.5524559676184225No Hit
ATGTTGGACGTGTGCCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTG1970.5387813149546001No Hit
ATGTTGGACGTGTGCCAGCCGCCGCGGTAATACGGAGGATGCGAGCGTTA1950.5333114538890712No Hit
ATGTTGGACGTGTGCCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTG1930.5278415928235423No Hit
ATACCGGTTCCGGACTACCCGGGTTTCTAATCCTGTTTGCTACCCACGCT1880.51416694015972No Hit
ATACCGGTTCCGGACTACTAGGGTATCTAATCCTGTTTGCTACCCACGCT1870.5114320096269556No Hit
ATACCGGTTCCGGACTACGGGGGTATCTAATCCTGTTTGCTACCCACGCT1800.4922874958976042No Hit
ATACCGGTTCCGGACTACTGGGGTATCTAATCCTGTTCGCTCCCCATGCT1770.4840827042993108No Hit
ATGTTGGACGTGTGTCAGCCGCCGCGGTAATACGTATGTCACAAGCGTTA1610.4403238157750793No Hit
ATACCGGTTCCGGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCT1590.43485395470955035No Hit
ATGTTGGACGTGTGTCAGCAGCCGCGGTAATACGTATGTCACAAGCGTTA1580.43211902417678594No Hit
ATACCGGTTCCGGACTACAGGGGTATCTAATCCTGTTTGCTACCCACGCT1560.426649163111257No Hit
ATACCGGTTCCGGACTACTCGGGTTTCTAATCCTGTTCGCTCCCCATGCT1510.41297451044743466No Hit
ATACCGGTTCCGGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCT1460.39929985778361227No Hit
ATACCGGTTCCGGACTACCAGGGTTTCTAATCCTGTTTGCTACCCACGCT1430.3910950661853189No Hit
ATACCGGTTCCGGACTACACGGGTTTCTAATCCTGTTTGCTACCCACGCT1400.38289027458702546No Hit
ATACCGGTTCCGGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCT1390.38015534405426105No Hit
ATACCGGTTCCGGACTACGCGGGTTTCTAATCCTGTTTGCTACCCACGCT1390.38015534405426105No Hit
ATACCGGTTCCGGACTACCGGGGTTTCTAATCCTGTTCGCTCCCCATGCT1370.37468548298873205No Hit
ATGTTGGACGTGTGTCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTA1340.36648069139043865No Hit
ATGTTGGACGTGTGTCAGCCGCCGCGGTAATACGTAGGGGGCAAGCGTTA1340.36648069139043865No Hit
ATACCGGTTCCGGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCT1340.36648069139043865No Hit
ATACCGGTTCCGGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCT1320.36101083032490977No Hit
ATACCGGTTCCGGACTACTGGGGTTTCTAATCCTGTTCGATACCCGCACC1280.35007110819385184No Hit
ATACCGGTTCCGGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCT1210.33092659446450057No Hit
ATACCGGTTCCGGACTACGAGGGTTTCTAATCCTGTTTGCTACCCACGCT1200.32819166393173616No Hit
ATGTTGGACGTGTGTCAGCCGCCGCGGTAATACGGAAGGTCCGGGCGTTA1170.31998687233344275No Hit
ATACCGGTTCCGGACTACTGGGGTTTCTAATCCTGTTTGATACCCACGCT1170.31998687233344275No Hit
ATGTTGGACGTGTGCCAGCAGCCGCGGTAATACGTATGTCACAAGCGTTA1160.3172519418006783No Hit
ATGTTGGACGTGTGTCAGCAGCCGCGGTAATACGGAAGGTCCGGGCGTTA1160.3172519418006783No Hit
ATGTTGGACGTGTGTCAGCCGCCGCGGTAATACGGAGGATACGAGCGTTA1150.31451701126791376No Hit
ATGTTGGACGTGTGTCAGCAGCCGCGGTAATACGGAGGATACGAGCGTTA1130.3090471502023849No Hit
ATACCGGTTCCGGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCT1120.30631221966962036No Hit
ATACCGGTTCCGGACTACAAGGGTTTCTAATCCTGTTTGCTACCCACGCT1100.3008423586040915No Hit
ATGTTGGACGTGTGTCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTA1080.29537249753856254No Hit
ATGTTGGACGTGTGTCAGCAGCCGCGGTAATACGTATGTCACGAGCGTTA1050.28716770594026914No Hit
ATACCGGTTCCGGACTACTGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT1020.27896291434197573No Hit
ATACCGGTTCCGGACTACTGGGGTTTCTAATCCTGTTCGCTCCCCACGCT970.2652882616781534No Hit
ATGTTGGACGTGTGCCAGCCGCCGCGGTAATACGTATGTCACAAGCGTTA950.25981840061262446No Hit
ATACCGGTTCCGGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCT950.25981840061262446No Hit
ATACCGGTTCCGGACTACTCGGGTATCTAATCCTGTTCGCTCCCCATGCT930.25434853954709546No Hit
ATACCGGTTCCGGACTACTGGGGTATCTAATCCTGTTCGATACCCGCACC920.25161360901433105No Hit
ATACCGGTTCCGGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCT920.25161360901433105No Hit
ATACCGGTTCCGGACTACTAGGGTTTCTAATCCTGTTCGCTCCCCATGCT900.2461437479488021No Hit
ATACCGGTTCCGGACTACGCGGGTATCTAATCCTGTTTGCTACCCACGCT890.24340881741603762No Hit
ATGTTGGACGTGTGTCAGCCGCCGCGGTAATACGTATGTCACGAGCGTTA830.2269992342194508No Hit
ATACCGGTTCCGGACTACCCGGGTATCTAATCCTGTTTGCTACCCACGCT820.22426430368668637No Hit
ATACCGGTTCCGGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCT810.2215293731539219No Hit
ATACCGGTTCCGGACTACAGGGGTTTCTAATCCTGTTCGCTCCCCATGCT810.2215293731539219No Hit
ATGTTGGACGTGTGCCAGCCGCCGCGGTAATACGTAGGGGGCAAGCGTTA790.21605951208839297No Hit
ATACCGGTTCCGGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCT770.210589651022864No Hit
ATGTTGGACGTGTGCCAGCCGCCGCGGTAATACGGAAGGTCCGGGCGTTA770.210589651022864No Hit
ATACCGGTTCCGGACTACTGGGGTTTCTAATCCTGTTCGATACCCGCACT760.20785472049009956No Hit
ATGTTGGACGTGTGTCAGCAGCCGCGGTAATACGTATGTCGCAAGCGTTA740.2023848594245706No Hit
ATACCGGTTCCGGACTACCGGGGTATCTAATCCTGTTCGCTCCCCATGCT740.2023848594245706No Hit
ATGTTGGACGTGTGCCAGCAGCCGCGGTAATACGGAAGGTCCGGGCGTTA730.19964992889180613No Hit
ATGTTGGACGTGTGCCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTA730.19964992889180613No Hit
ATACCGGTTCCGGACTACTGGGGTTTCTAATCCTGTTTGATCCCCACGCT720.1969149983590417No Hit
ATACCGGTTCCGGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCT720.1969149983590417No Hit
ATACCGGTTCCGGACTACTCGGGTTTCTAATCCTGTTCGATACCCGCACC720.1969149983590417No Hit
ATACCGGTTCCGGACTACTGGGGTTTCTAATCCTGTTTGATACCCACGCC710.19418006782627723No Hit
ATGTTGGACGTGTGCCAGCAGCCGCGGTAATACGGAGGATACGAGCGTTA700.19144513729351273No Hit
ATACCGGTTCCGGACTACTGGGGTATCTAATCCTGTTTGATACCCACGCT690.1887102067607483No Hit
ATACCGGTTCCGGACTACCGGGGTTTCTAATCCTGTTCGATACCCGCACC690.1887102067607483No Hit
ATGTTGGACGTGTGTCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTA690.1887102067607483No Hit
ATACCGGTTCCGGACTACTGGGGTTTCTAATCCTGTTTGATACCCGCACC680.18597527622798382No Hit
ATGTTGGACGTGTGCCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTA660.18050541516245489No Hit
ATACCGGTTCCGGACTACTCGGGTTTCTAATCCTGTTTGATACCCACGCT660.18050541516245489No Hit
ATGTTGGACGTGTGCCAGCCGCCGCGGTAATACGGAGGATACGAGCGTTA660.18050541516245489No Hit
ATACCGGTTCCGGACTACCAGGGTATCTAATCCTGTTTGCTACCCACGCT650.17777048462969042No Hit
ATGTTGGACGTGTGTCAGCCGCCGCGGTAATACGTATGTCGCAAGCGTTA640.17503555409692592No Hit
ATGTTGGACGTGTGTCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTA630.17230062356416148No Hit
ATGTTGGACGTGTGCCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTA630.17230062356416148No Hit
ATACCGGTTCCGGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCT620.16956569303139699No Hit
ATACCGGTTCCGGACTACGAGGGTATCTAATCCTGTTTGCTACCCACGCT610.16683076249863255No Hit
ATGTTGGACGTGTGCCAGCAGCCGCGGTAATACGTATGTCGCAAGCGTTA610.16683076249863255No Hit
ATACCGGTTCCGGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCTAGCT610.16683076249863255No Hit
ATACCGGTTCCGGACTACGGGGGTTTCTAATCCTGTTCGCTCCCCATGCT600.16409583196586808No Hit
ATACCGGTTCCGGACTACACGGGTATCTAATCCTGTTTGCTACCCACGCT600.16409583196586808No Hit
ATACCGGTTCCGGACTACCGGGGTTTCTAATCCTGTTTGATACCCACGCC590.16136090143310358No Hit
ATACCGGTTCCGGACTACAAGGGTATCTAATCCTGTTTGCTACCCACGCT590.16136090143310358No Hit
ATGTTGGACGTGTGTCAGCCGCCGCGGTAATACGTAGGGGGCTAGCGTTA580.15862597090033914No Hit
ATGTTGGACGTGTGCCAGCCGCCGCGGTAATACGTATGTCGCAAGCGTTA570.15589104036757467No Hit
ATGTTGGACGTGTGCCAGCCGCCGCGGTAATACGTATGTCACGAGCGTTA570.15589104036757467No Hit
ATGTTGGACGTGTGTCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA570.15589104036757467No Hit
ATACCGGTTCCGGACTACTGGGGTATCTAATCCCGTTCGCTCCCCTGGCT570.15589104036757467No Hit
ATGTTGGACGTGTGTCAGCCGCCGCGGTAATACGTAGGGTGCAAGCGTTA550.15042117930204574No Hit
ATACCGGTTCCGGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCT550.15042117930204574No Hit
ATGTTGGACGTGTGTCAGCCGCCGCGGTAATACGGAGGGTGCAAGCGTTA540.14768624876928127No Hit
ATACCGGTTCCGGACTACTCGGGTTTCTAATCCTGTTCGCTCCCCACGCT540.14768624876928127No Hit
ATACCGGTTCCGGACTACTGGGGTATCTAATCCTGTTCGCTCCCCACGCT530.14495131823651677No Hit
ATACCGGTTCCGGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCT520.14221638770375233No Hit
ATACCGGTTCCGGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCT520.14221638770375233No Hit
ATACCGGTTCCGGACTACCGGGGTTTCTAATCCTGTTCGCTCCCCACGCT500.1367465266382234No Hit
ATACCGGTTCCGGACTACCGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT490.13401159610545893No Hit
ATACCGGTTCCGGACTACCCGGGTTTCTAATCCTGTTCGCTCCCCATGCT480.13127666557269443No Hit
ATACCGGTTCCGGACTACTGGGGTATCTAATCCTGTTCGATACCCGCACT480.13127666557269443No Hit
ATACCGGTTCCGGACTACTCGGGTATCTAATCCTGTTCGATACCCGCACC480.13127666557269443No Hit
ATACCGGTTCCGGACTACTAGGGTATCTAATCCTGTTCGCTCCCCATGCT480.13127666557269443No Hit
ATACCGGTTCCGGACTACGCGGGTTTCTAATCCTGTTCGCTCCCCATGCT460.12580680450716553No Hit
ATACCGGTTCCGGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCGCACC460.12580680450716553No Hit
ATGTTGGACGTGTGTCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTA450.12307187397440104No Hit
ATACCGGTTCCGGACTACCGGGGTATCTAATCCTGTTCGATACCCGCACC440.12033694344163659No Hit
ATACCGGTTCCGGACTACTCGGGTTTCTAATCCTGTTCGATACCCGCACT430.11760201290887211No Hit
ATACCGGTTCCGGACTACAGGGGTATCTAATCCTGTTCGCTCCCCATGCT430.11760201290887211No Hit
ATGTTGGACGTGTGTCAGCCGCCGCGGTAACACGTAAGGGGCGAGCGTTG430.11760201290887211No Hit
ATACCGGTTCCGGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCT420.11486708237610765No Hit
ATGTTGGACGTGTGTCAGCAGCCGCGGTAATACGTATGTCGCGAGCGTTA420.11486708237610765No Hit
ATGTTGGACGTGTGTCAGCCGCCGCGGTAATACGTATGTCGCGAGCGTTA410.11213215184334319No Hit
ATACCGGTTCCGGACTACGGGGGTATCTAATCCTGTTCGCTCCCCATGCT400.1093972213105787No Hit
ATGTTGGACGTGTGCCAGCAGCCGCGGTAATACGTATGTCACGAGCGTTA400.1093972213105787No Hit
ATACCGGTTCCGGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCT390.10666229077781425No Hit
ATACCGGTTCCGGACTACCGGGGTTTCTAATCCTGTTTGATACCCACGCT390.10666229077781425No Hit
ATGTTGGACGTGTGTCAGCAGCCGCGGTAATACGTAGGTGGCGAGCGTTG390.10666229077781425No Hit
ATACCGGTTCCGGACTACCGGGGTTTCTAATCCTGTTCGATACCCGCACT380.10392736024504978No Hit
ATACCGGTTCCGGACTACCAGGGTTTCTAATCCTGTTCGCTCCCCATGCT370.1011924297122853No Hit
ATACCGGTTCCGGACTACTCGGGTTTCTAATCCCGTTCGCTCCCCTGGCT370.1011924297122853No Hit
ATACCGGTTCCGGACTACTAGGGTTTCTAATCCTGTTCGATACCCGCACC370.1011924297122853No Hit
ATGTTGGACGTGTGTCAGCAGCCGCGGTAATACGGGGGGTGCGAGCGTTA370.1011924297122853No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)